Literature DB >> 8386008

Simulation of saturation transfer electron paramagnetic resonance spectra for rotational motion with restricted angular amplitude.

E C Howard1, K M Lindahl, C F Polnaszek, D D Thomas.   

Abstract

We have simulated both conventional (V1) and saturation transfer (V'2) electron paramagnetic resonance spectra for the case of Brownian rotational diffusion restricted in angular amplitude. Numerical solutions of the diffusion-coupled Bloch equations were obtained for an axially symmetric 14N nitroxide spin label with its principal axis rotating within a Gaussian angular distribution of full width delta theta at half maximum. Spectra were first calculated for a macroscopically oriented system with cylindrical symmetry (e.g., a bundle of muscle fibers or a stack of membrane bilayers), with the Gaussian angular distribution centered at theta 0 with respect to the magnetic field. These spectra were then summed over theta 0 to obtain the spectrum of a randomly oriented sample (e.g., a dispersion of myofibrils or membrane vesicles). The angular amplitude delta theta was varied from 0 degrees, corresponding to isotropic motion (order parameter = 0). For each value of delta theta, the rotational correlation time, tau r, was varied from 10(-7) to 10(-2) s, spanning the range from maximal to minimal saturation transfer. We provide plots that illustrate the dependence of spectral parameters on delta theta and tau r. For an oriented system, the effects of changing delta theta and tau r are easily distinguishable, and both parameters can be determined unambiguously by comparing simulated and experimental spectra. For a macroscopically disordered system, the simulated spectra are still quite sensitive to delta theta, but a decrease in tau r produces changes similar to those from an increase in delta theta. If delta theta can be determined independently, then the results of the present study can be used to determine tau r from experimental spectra. Similarly, if tau r is known, then delta theta can be determined.

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Year:  1993        PMID: 8386008      PMCID: PMC1262370          DOI: 10.1016/S0006-3495(93)81417-6

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  26 in total

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Authors:  D D Thomas
Journal:  Biophys J       Date:  1978-11       Impact factor: 4.033

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Authors:  S Schreier; C F Polnaszek; I C Smith
Journal:  Biochim Biophys Acta       Date:  1978-12-15

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Authors:  K Kinosita; S Kawato; A Ikegami
Journal:  Biophys J       Date:  1977-12       Impact factor: 4.033

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Authors:  C Hidalgo; D D Thomas; N Ikemoto
Journal:  J Biol Chem       Date:  1978-10-10       Impact factor: 5.157

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Journal:  J Mol Biol       Date:  1971-07-14       Impact factor: 5.469

6.  Proposed mechanism of force generation in striated muscle.

Authors:  A F Huxley; R M Simmons
Journal:  Nature       Date:  1971-10-22       Impact factor: 49.962

7.  35-GHz (Q-band) saturation transfer electron paramagnetic resonance studies of rotational diffusion.

Authors:  M E Johnson; J S Hyde
Journal:  Biochemistry       Date:  1981-05-12       Impact factor: 3.162

8.  Molecular motion in phospholipid bilayers in the gel phase: long axis rotation.

Authors:  D Marsh
Journal:  Biochemistry       Date:  1980-04-15       Impact factor: 3.162

9.  Saturation transfer electron spin resonance spectroscopy as a probe of anisotropic motion in model membrane systems.

Authors:  M Delmelle; K W Butler; I C Smith
Journal:  Biochemistry       Date:  1980-02-19       Impact factor: 3.162

10.  Effect of librational motion on fluorescence depolarization and nuclear magnetic resonance relaxation in macromolecules and membranes.

Authors:  G Lipari; A Szabo
Journal:  Biophys J       Date:  1980-06       Impact factor: 4.033

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  12 in total

1.  The sensitivity of saturation transfer electron paramagnetic resonance spectra to restricted amplitude uniaxial rotational diffusion.

Authors:  E J Hustedt; A H Beth
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Independent mobility of catalytic and regulatory domains of myosin heads.

Authors:  B Adhikari; K Hideg; P G Fajer
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

3.  High field/high frequency saturation transfer electron paramagnetic resonance spectroscopy: increased sensitivity to very slow rotational motions.

Authors:  Eric J Hustedt; Albert H Beth
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

4.  Regulatory and catalytic domain dynamics of smooth muscle myosin filaments.

Authors:  Hui-Chun Li; Likai Song; Bridget Salzameda; Christine R Cremo; Piotr G Fajer
Journal:  Biochemistry       Date:  2006-05-16       Impact factor: 3.162

5.  Structural dynamics of the actomyosin complex probed by a bifunctional spin label that cross-links SH1 and SH2.

Authors:  Andrew R Thompson; Nariman Naber; Clyde Wilson; Roger Cooke; David D Thomas
Journal:  Biophys J       Date:  2008-09-19       Impact factor: 4.033

6.  Protein-protein interactions in calcium transport regulation probed by saturation transfer electron paramagnetic resonance.

Authors:  Zachary M James; Jesse E McCaffrey; Kurt D Torgersen; Christine B Karim; David D Thomas
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

7.  Myosin head orientation and mobility during isometric contraction: effects of osmotic compression.

Authors:  B B Adhikari; P G Fajer
Journal:  Biophys J       Date:  1996-04       Impact factor: 4.033

8.  Saturation transfer electron parametric resonance of an indane-dione spin-label. Calibration with hemoglobin and application to myosin rotational dynamics.

Authors:  O Roopnarine; K Hideg; D D Thomas
Journal:  Biophys J       Date:  1993-06       Impact factor: 4.033

9.  Rotational dynamics of actin-bound intermediates of the myosin adenosine triphosphatase cycle in myofibrils.

Authors:  C L Berger; D D Thomas
Journal:  Biophys J       Date:  1994-07       Impact factor: 4.033

10.  Analysis of saturation transfer electron paramagnetic resonance spectra of a spin-labeled integral membrane protein, band 3, in terms of the uniaxial rotational diffusion model.

Authors:  E J Hustedt; A H Beth
Journal:  Biophys J       Date:  1995-10       Impact factor: 4.033

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