Literature DB >> 7260284

Effect of librational motion on fluorescence depolarization and nuclear magnetic resonance relaxation in macromolecules and membranes.

G Lipari, A Szabo.   

Abstract

The theory of fluorescent emission anisotropy [r(t)] of a cylindrical probe in a membrane suspension is developed. It is shown, independent of any model, that the limiting anisotropy [r(infinity)] is proportional to the square to the order parameter of the probe. The order parameter determines the first nontrivial term in the expansion of the equilibrium orientational distribution function of the probe in a series of Legendre polynomials. Following Kinosita, Kawato, and Ikegami, the motion of the probe is described as diffusion ("wobbling") within a cone of semiangle theta 0. Within the framework of this model, an accurate single-exponential approximation for r(t) is considered. An analytic expression relating the effective relaxation time, which appears in the above approximation, to theta 0 and the diffusion coefficient for wobbling is derived. The model is generalized to the situation where the probe is attached to a macromolecule whose motion cannot be neglected on the time scale of the fluorescence experiment. Finally, by exploiting the formal similarity between the theory of fluorescence depolarization and 13C-NMR dipolar relaxation, expressions for T1, T2, and the nuclear Overhauser enhancement are derived for a protonated carbon which is nonrigidly attached to a macromolecule and undergoes librational motion described as diffusion on a spherical "cap" of semiangle theta 0.

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Year:  1980        PMID: 7260284      PMCID: PMC1328752          DOI: 10.1016/S0006-3495(80)85109-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  5 in total

1.  A theory of fluorescence polarization decay in membranes.

Authors:  K Kinosita; S Kawato; A Ikegami
Journal:  Biophys J       Date:  1977-12       Impact factor: 4.033

2.  Subnanosecond motions of tryptophan residues in proteins.

Authors:  I Munro; I Pecht; L Stryer
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

3.  Quantitation of hindered rotations of diphenylhexatriene in lipid bilayers by differential polarized phase fluorometry.

Authors:  J R Lakowicz; F G Prendergast
Journal:  Science       Date:  1978-06-23       Impact factor: 47.728

4.  Differential polarized phase fluorometric investigations of diphenylhexatriene in lipid bilayers. Quantitation of hindered depolarizing rotations.

Authors:  J R Lakowicz; F G Prendergast; D Hogen
Journal:  Biochemistry       Date:  1979-02-06       Impact factor: 3.162

5.  Effect of cholesterol on the molecular motion in the hydrocarbon region of lecithin bilayers studied by nanosecond fluorescence techniques.

Authors:  S Kawato; K Kinosita; A Ikegami
Journal:  Biochemistry       Date:  1978-11-14       Impact factor: 3.162

  5 in total
  122 in total

1.  Polarized fluorescence microscopy of individual and many kinesin motors bound to axonemal microtubules.

Authors:  E J Peterman; H Sosa; L S Goldstein; W E Moerner
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

2.  Quantification of allosteric influence of Escherichia coli phosphofructokinase by frequency domain fluorescence.

Authors:  Audrey S Pham; Gregory D Reinhart
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

3.  Dynamic fluorescence anisotropy imaging microscopy in the frequency domain (rFLIM).

Authors:  Andrew H A Clayton; Quentin S Hanley; Donna J Arndt-Jovin; Vinod Subramaniam; Thomas M Jovin
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

4.  Rotational dynamics of type I Fc epsilon receptors on individually-selected rat mast cells studied by polarized fluorescence depletion.

Authors:  N A Rahman; I Pecht; D A Roess; B G Barisas
Journal:  Biophys J       Date:  1992-02       Impact factor: 4.033

Review 5.  Structural dynamics of bio-macromolecules by NMR: the slowly relaxing local structure approach.

Authors:  Eva Meirovitch; Yury E Shapiro; Antonino Polimeno; Jack H Freed
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

6.  Classic Analysis of Biopolymer Dynamics Is Model Free.

Authors:  R Bryn Fenwick; H Jane Dyson
Journal:  Biophys J       Date:  2016-01-05       Impact factor: 4.033

7.  Observation of protein folding/unfolding dynamics of ubiquitin trapped in agarose gel by single-molecule FRET.

Authors:  Li-Ling Yang; Michael W-P Kao; Hsin-Liang Chen; Tsong-Shin Lim; Wunshain Fann; Rita P-Y Chen
Journal:  Eur Biophys J       Date:  2011-11-09       Impact factor: 1.733

8.  The effect of metals on SDS-induced partially folded states of CopC.

Authors:  Zhen Song; Jie Ming; Binsheng Yang
Journal:  J Biol Inorg Chem       Date:  2013-12-11       Impact factor: 3.358

9.  Mapping of the spectral density function of a C alpha-H alpha bond vector from NMR relaxation rates of a 13C-labelled alpha-carbon in motilin.

Authors:  P Allard; J Jarvet; A Ehrenberg; A Gräslund
Journal:  J Biomol NMR       Date:  1995-02       Impact factor: 2.835

10.  Molecular dynamics in mouse atrial tumor sarcoplasmic reticulum.

Authors:  J C Voss; J E Mahaney; L R Jones; D D Thomas
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

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