Literature DB >> 8384707

Some biochemical properties of an acyclic oligonucleotide analogue. A plausible ancestor of the DNA?

L Merle1, G Spach, Y Merle, J Sági, A Szemzö.   

Abstract

As acyclic oligonucleotides have been suggested as a primitive model of DNA or RNA in prebiotic times, we compared some biochemical properties of these analogues to that of natural ones. Firstly, an acyclic analogue of deoxyribonucleoside triphosphates was tested as a potential substrate of enzymes intervening in nucleic acids synthesis. GlyTTP, a dTTP analogue with a missing 2'-methylene group is not accepted as a substrate by either DNA polymerase or deoxynucleotidyl terminal transferase (TdT). Secondly, the modified dodecathymidylate (GlyT)12, the racemic acyclic sugar analogue of (dT)12, proved to be an efficient primer for DNA polymerase and TdT, though the associative properties of (GlyT)12 are very weak as shown by UV spectroscopy in phosphate buffer without magnesium chloride. But (GlyT)12 has the advantage to be 500-times more stable against hydrolysis by snake venom phosphodiesterase than the corresponding oligothymidylate.

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Year:  1993        PMID: 8384707     DOI: 10.1007/bf01581874

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  11 in total

1.  Effect of acyclic pyrimidines related to 9-[(1,3-dihydroxy-2-propoxy)methyl]guanine on herpesviruses.

Authors:  L M Beauchamp; B L Serling; J E Kelsey; K K Biron; P Collins; J Selway; J C Lin; H J Schaeffer
Journal:  J Med Chem       Date:  1988-01       Impact factor: 7.446

2.  Activity of polynucleotide phosphorylase with nucleoside dephosphates containing sugar ring modifications.

Authors:  D M Hawley; J J Sninsky; G N Bennett; P T Gilham
Journal:  Biochemistry       Date:  1978-05-30       Impact factor: 3.162

3.  The case for an ancestral genetic system involving simple analogues of the nucleotides.

Authors:  G F Joyce; A W Schwartz; S L Miller; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

4.  Chiral versus chemical evolutions and the appearance of life.

Authors:  G Spach
Journal:  Orig Life       Date:  1984

5.  Some acyclic analogues of nucleotides and their template-directed reactions.

Authors:  M Tohidi; L E Orgel
Journal:  J Mol Evol       Date:  1989       Impact factor: 2.395

6.  Biochemical properties of oligo [(+)-carbocyclic-thymidylates] and their complexes.

Authors:  J Sági; A Szemzõ; J Szécsi; L Otvös
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

7.  Oligomerization reactions of deoxyribonucleotides on montmorillonite clay: the effect of mononucleotide structure, phosphate activation and montmorillonite composition on phosphodiester bond formation.

Authors:  J P Ferris; G Ertem
Journal:  Orig Life Evol Biosph       Date:  1990       Impact factor: 1.950

8.  Oligodeoxythymidylate: polydeoxyadenylate and oligodeoxyadenylate: polydeoxythymidylate interactions.

Authors:  G R Cassani; F J Bollum
Journal:  Biochemistry       Date:  1969-10       Impact factor: 3.162

9.  Interaction of herpes simplex virus-induced DNA polymerase with 9-(1,3-dihydroxy-2-propoxymethyl)guanine triphosphate.

Authors:  K B Frank; J F Chiou; Y C Cheng
Journal:  J Biol Chem       Date:  1984-02-10       Impact factor: 5.157

10.  Simple and rapid procedure for synthesis of deoxynucleoside 3'-2-cyanoethyl-N,N-diisopropyl-amino phosphites.

Authors:  A Kraszewski; K E Norris
Journal:  Nucleic Acids Symp Ser       Date:  1987
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