Literature DB >> 8380887

A mobile group I intron from Physarum polycephalum can insert itself and induce point mutations in the nuclear ribosomal DNA of saccharomyces cerevisiae.

D E Muscarella1, V M Vogt.   

Abstract

Pp LSU3 is a mobile group I intron in the extrachromosomal nuclear ribosomal DNA (rDNA) of Physarum polycephalum. As found for other mobile introns, Pp LSU3 encodes a site-specific endonuclease, I-Ppo, which mediates "homing" to unoccupied target sites in Physarum rDNA. The recognition sequence for this enzyme is conserved in all eucaryotic nuclear rDNAs. We have introduced this intron into a heterologous species, Saccharomyces cerevisiae, in which nuclear group I introns have not been detected. The expression of Pp LSU3, under control of the inducible GAL10 promoter, was found to be lethal as a consequence of double-strand breaks in the rDNA. However, surviving colonies that are resistant to the lethal effects of I-Ppo because of alterations in the rDNA at the cleavage site were recovered readily. These survivors are of two classes. The first comprises cells that acquired one of three types of point mutations. The second comprises cells in which Pp LSU3 became inserted into the rDNA. In both cases, each resistant survivor appears to carry the same alterations in all approximately 150 rDNA repeats. When it is embedded in yeast rDNA, Pp LSU3 leads to the synthesis of I-Ppo and appears to be mobile in appropriate genetic crosses. The existence of yeast cells carrying a mobile intron should allow dissection of the steps that allow expression of the highly unusual I-Ppo gene.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8380887      PMCID: PMC358987          DOI: 10.1128/mcb.13.2.1023-1033.1993

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  55 in total

1.  The repair of double-strand breaks in DNA; a model involving recombination.

Authors:  M A Resnick
Journal:  J Theor Biol       Date:  1976-06       Impact factor: 2.691

2.  Genetic control of radiation sensitivity in Saccharomyces cerevisiae.

Authors:  M A Resnick
Journal:  Genetics       Date:  1969-07       Impact factor: 4.562

3.  Nucleotide sequence of the ribosomal RNA gene of Physarum polycephalum: intron 2 and its flanking regions of the 26S rRNA gene.

Authors:  H Nomiyama; S Kuhara; T Kukita; T Otsuka; Y Sakaki
Journal:  Nucleic Acids Res       Date:  1981-11-11       Impact factor: 16.971

4.  The structure of the yeast ribosomal RNA genes. 4. Complete sequence of the 25 S rRNA gene from Saccharomyces cerevisae.

Authors:  O I Georgiev; N Nikolaev; A A Hadjiolov; K G Skryabin; V M Zakharyev; A A Bayev
Journal:  Nucleic Acids Res       Date:  1981-12-21       Impact factor: 16.971

5.  Yeast ribosomal DNA genes are located on chromosome XII.

Authors:  T D Petes
Journal:  Proc Natl Acad Sci U S A       Date:  1979-01       Impact factor: 11.205

6.  Unequal crossing over in the ribosomal DNA of Saccharomyces cerevisiae.

Authors:  J W Szostak; R Wu
Journal:  Nature       Date:  1980-04-03       Impact factor: 49.962

7.  Unequal meiotic recombination within tandem arrays of yeast ribosomal DNA genes.

Authors:  T D Petes
Journal:  Cell       Date:  1980-03       Impact factor: 41.582

8.  Simple Mendelian inheritance of the reiterated ribosomal DNA of yeast.

Authors:  T D Petes; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

9.  Characterization of double-strand break-induced recombination: homology requirements and single-stranded DNA formation.

Authors:  N Sugawara; J E Haber
Journal:  Mol Cell Biol       Date:  1992-02       Impact factor: 4.272

10.  Yeast transformation: a model system for the study of recombination.

Authors:  T L Orr-Weaver; J W Szostak; R J Rothstein
Journal:  Proc Natl Acad Sci U S A       Date:  1981-10       Impact factor: 11.205

View more
  21 in total

1.  In vivo expression of the nucleolar group I intron-encoded I-dirI homing endonuclease involves the removal of a spliceosomal intron.

Authors:  A Vader; H Nielsen; S Johansen
Journal:  EMBO J       Date:  1999-02-15       Impact factor: 11.598

2.  Mobile self-splicing group I introns from the psbA gene of Chlamydomonas reinhardtii: highly efficient homing of an exogenous intron containing its own promoter.

Authors:  O W Odom; S P Holloway; N N Deshpande; J Lee; D L Herrin
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

3.  Spontaneous rDNA copy number variation modulates Sir2 levels and epigenetic gene silencing.

Authors:  Agnès H Michel; Benoît Kornmann; Karine Dubrana; David Shore
Journal:  Genes Dev       Date:  2005-05-15       Impact factor: 11.361

4.  RNase H eliminates R-loops that disrupt DNA replication but is nonessential for efficient DSB repair.

Authors:  Hongchang Zhao; Min Zhu; Oliver Limbo; Paul Russell
Journal:  EMBO Rep       Date:  2018-04-05       Impact factor: 8.807

5.  I-PpoI, the endonuclease encoded by the group I intron PpLSU3, is expressed from an RNA polymerase I transcript.

Authors:  J Lin; V M Vogt
Journal:  Mol Cell Biol       Date:  1998-10       Impact factor: 4.272

Review 6.  Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways.

Authors:  Hannah L Klein; Giedrė Bačinskaja; Jun Che; Anais Cheblal; Rajula Elango; Anastasiya Epshtein; Devon M Fitzgerald; Belén Gómez-González; Sharik R Khan; Sandeep Kumar; Bryan A Leland; Léa Marie; Qian Mei; Judith Miné-Hattab; Alicja Piotrowska; Erica J Polleys; Christopher D Putnam; Elina A Radchenko; Anissia Ait Saada; Cynthia J Sakofsky; Eun Yong Shim; Mathew Stracy; Jun Xia; Zhenxin Yan; Yi Yin; Andrés Aguilera; Juan Lucas Argueso; Catherine H Freudenreich; Susan M Gasser; Dmitry A Gordenin; James E Haber; Grzegorz Ira; Sue Jinks-Robertson; Megan C King; Richard D Kolodner; Andrei Kuzminov; Sarah Ae Lambert; Sang Eun Lee; Kyle M Miller; Sergei M Mirkin; Thomas D Petes; Susan M Rosenberg; Rodney Rothstein; Lorraine S Symington; Pawel Zawadzki; Nayun Kim; Michael Lisby; Anna Malkova
Journal:  Microb Cell       Date:  2019-01-07

7.  Functional alpha-fragment of beta-galactosidase can be expressed from the mobile group I intron PpLSU3 embedded in yeast pre-ribosomal RNA derived from the chromosomal rDNA locus.

Authors:  J Lin; V M Vogt
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

8.  Gene conversion plays the major role in controlling the stability of large tandem repeats in yeast.

Authors:  S Gangloff; H Zou; R Rothstein
Journal:  EMBO J       Date:  1996-04-01       Impact factor: 11.598

9.  Expression of the Naegleria intron endonuclease is dependent on a functional group I self-cleaving ribozyme.

Authors:  W A Decatur; S Johansen; V M Vogt
Journal:  RNA       Date:  2000-04       Impact factor: 4.942

Review 10.  Homing endonucleases: from basics to therapeutic applications.

Authors:  Maria J Marcaida; Inés G Muñoz; Francisco J Blanco; Jesús Prieto; Guillermo Montoya
Journal:  Cell Mol Life Sci       Date:  2010-03       Impact factor: 9.261

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.