Literature DB >> 8369448

The nature of cation-pi binding: interactions between tetramethylammonium ion and benzene in aqueous solution.

J Gao1, L W Chou, A Auerbach.   

Abstract

A combined quantum mechanical and molecular mechanical Monte Carlo simulation method was used to determine the free energy of binding between tetramethylammonium ion (TMA+) and benzene in water. The computed free energy as a function of distance (the potential of mean force) has two minima that represent contact and solvent-separated complexes. These species are separated by a broad barrier of about 3 kJ/mol. The results are in good accord with experimental data and suggest that TMA+ binds to benzene more favorably than to chloride ion, with an association constant of about 0.8 M-1.

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Year:  1993        PMID: 8369448      PMCID: PMC1225698          DOI: 10.1016/S0006-3495(93)81031-2

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  14 in total

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Authors:  M Karplus; G A Petsko
Journal:  Nature       Date:  1990-10-18       Impact factor: 49.962

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Authors:  A J Yool; T L Schwarz
Journal:  Nature       Date:  1991-02-21       Impact factor: 49.962

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Journal:  FEBS Lett       Date:  1986-07-28       Impact factor: 4.124

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Authors:  D Shoup; A Szabo
Journal:  Biophys J       Date:  1982-10       Impact factor: 4.033

5.  Mutations affecting internal TEA blockade identify the probable pore-forming region of a K+ channel.

Authors:  G Yellen; M E Jurman; T Abramson; R MacKinnon
Journal:  Science       Date:  1991-02-22       Impact factor: 47.728

6.  Mutations affecting agonist sensitivity of the nicotinic acetylcholine receptor.

Authors:  G F Tomaselli; J T McLaughlin; M E Jurman; E Hawrot; G Yellen
Journal:  Biophys J       Date:  1991-09       Impact factor: 4.033

7.  Acetylcholine binding by a synthetic receptor: implications for biological recognition.

Authors:  D A Dougherty; D A Stauffer
Journal:  Science       Date:  1990-12-14       Impact factor: 47.728

8.  Interaction of fluorescence probes with acetylcholinesterase. The site and specificity of propidium binding.

Authors:  P Taylor; S Lappi
Journal:  Biochemistry       Date:  1975-05-06       Impact factor: 3.162

9.  Benzene forms hydrogen bonds with water.

Authors:  S Suzuki; P G Green; R E Bumgarner; S Dasgupta; W A Goddard; G A Blake
Journal:  Science       Date:  1992-08-14       Impact factor: 47.728

10.  The role of tyrosine at the ligand-binding site of the nicotinic acetylcholine receptor.

Authors:  S F Pearce; P Preston-Hurlburt; E Hawrot
Journal:  Proc Biol Sci       Date:  1990-09-22       Impact factor: 5.349

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  8 in total

1.  Extracellular blockade of K(+) channels by TEA: results from molecular dynamics simulations of the KcsA channel.

Authors:  S Crouzy; S Bernèche; B Roux
Journal:  J Gen Physiol       Date:  2001-08       Impact factor: 4.086

Review 2.  Cation-pi bonding and amino-aromatic interactions in the biomolecular recognition of substituted ammonium ligands.

Authors:  N S Scrutton; A R Raine
Journal:  Biochem J       Date:  1996-10-01       Impact factor: 3.857

3.  A preference-based free-energy parameterization of enzyme-inhibitor binding. Applications to HIV-1-protease inhibitor design.

Authors:  A Wallqvist; R L Jernigan; D G Covell
Journal:  Protein Sci       Date:  1995-09       Impact factor: 6.725

4.  Activation kinetics of recombinant mouse nicotinic acetylcholine receptors: mutations of alpha-subunit tyrosine 190 affect both binding and gating.

Authors:  J Chen; Y Zhang; G Akk; S Sine; A Auerbach
Journal:  Biophys J       Date:  1995-09       Impact factor: 4.033

5.  Energetics of gating at the apo-acetylcholine receptor transmitter binding site.

Authors:  Prasad Purohit; Anthony Auerbach
Journal:  J Gen Physiol       Date:  2010-04       Impact factor: 4.086

6.  QM/MM through the 1990s: The First Twenty Years of Method Development and Applications.

Authors:  Meiyi Liu; Yingjie Wang; Yakun Chen; Martin J Field; Jiali Gao
Journal:  Isr J Chem       Date:  2014-07-31       Impact factor: 3.333

7.  The alpha-5 segment of Bacillus thuringiensis delta-endotoxin: in vitro activity, ion channel formation and molecular modelling.

Authors:  E Gazit; D Bach; I D Kerr; M S Sansom; N Chejanovsky; Y Shai
Journal:  Biochem J       Date:  1994-12-15       Impact factor: 3.857

8.  Ion Selectivity in the ENaC/DEG Family: A Systematic Review with Supporting Analysis.

Authors:  Cédric Vallée; Brendan Howlin; Rebecca Lewis
Journal:  Int J Mol Sci       Date:  2021-10-12       Impact factor: 5.923

  8 in total

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