Literature DB >> 8347567

The molecular surface package.

M L Connolly.   

Abstract

The Molecular Surface Package is a reimplementation, in C, of a set of earlier FORTRAN programs for computing analytical molecular surfaces, areas, volumes, polyhedral molecular surfaces, and surface curvatures. The software does not do interactive molecular graphics, but it will produce pixel maps of smooth molecular surfaces. The polyhedral molecular surfaces are suited to display on graphics systems with real-time rendering of polyhedra.

Mesh:

Year:  1993        PMID: 8347567     DOI: 10.1016/0263-7855(93)87010-3

Source DB:  PubMed          Journal:  J Mol Graph        ISSN: 0263-7855


  136 in total

1.  The structural basis for the oriented assembly of a TBP/TFB/promoter complex.

Authors:  O Littlefield; Y Korkhin; P B Sigler
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation.

Authors:  S Datta; M M Prabu; M B Vaze; N Ganesh; N R Chandra; K Muniyappa; M Vijayan
Journal:  Nucleic Acids Res       Date:  2000-12-15       Impact factor: 16.971

3.  Thermal stability of hydrophobic heme pocket variants of oxidized cytochrome c.

Authors:  J R Liggins; T P Lo; G D Brayer; B T Nall
Journal:  Protein Sci       Date:  1999-12       Impact factor: 6.725

4.  High resolution refinement of beta-galactosidase in a new crystal form reveals multiple metal-binding sites and provides a structural basis for alpha-complementation.

Authors:  D H Juers; R H Jacobson; D Wigley; X J Zhang; R E Huber; D E Tronrud; B W Matthews
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

5.  Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil.

Authors:  S R Brych; S I Blaber; T M Logan; M Blaber
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

6.  One site fits both: a model for the ternary complex of folate + NADPH in R67 dihydrofolate reductase, a D2 symmetric enzyme.

Authors:  E E Howell; U Shukla; S N Hicks; R D Smiley; L A Kuhn; M I Zavodszky
Journal:  J Comput Aided Mol Des       Date:  2001-11       Impact factor: 3.686

7.  Rapid measurement of protein osmotic second virial coefficients by self-interaction chromatography.

Authors:  Peter M Tessier; Abraham M Lenhoff; Stanley I Sandler
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

8.  Modeling the hydration of proteins: prediction of structural and hydrodynamic parameters from X-ray diffraction and scattering data.

Authors:  Helmut Durchschlag; Peter Zipper
Journal:  Eur Biophys J       Date:  2003-04-25       Impact factor: 1.733

9.  Solution properties of γ-crystallins: hydration of fish and mammal γ-crystallins.

Authors:  Huaying Zhao; Yingwei Chen; Lenka Rezabkova; Zhengrong Wu; Graeme Wistow; Peter Schuck
Journal:  Protein Sci       Date:  2013-11-27       Impact factor: 6.725

10.  On-the-fly Numerical Surface Integration for Finite-Difference Poisson-Boltzmann Methods.

Authors:  Qin Cai; Xiang Ye; Jun Wang; Ray Luo
Journal:  J Chem Theory Comput       Date:  2011-11-01       Impact factor: 6.006

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