Literature DB >> 8346029

Human snRNP polypeptide D1 promotes pre-mRNA splicing in yeast and defines nonessential yeast Smd1p sequences.

B C Rymond1, L A Rokeach, S O Hoch.   

Abstract

Parallel investigations of yeast and metazoan pre-mRNA splicing have documented enormous complexity in the nucleic acid and protein components of the cellular splicing apparatus, the spliceosome. The degree to which yeast and metazoan spliceosomal proteins differ in composition and structure is currently unknown. In this report we demonstrate that the human small nuclear ribonucleoprotein (snRNP) polypeptide D1 complements the cell lethality, splicing deficiency, and snRNA instability phenotypes associated with a yeast smd1 null allele. Mutational analysis of yeast SMD1, guided by a comparison of the predicted yeast and human proteins, reveals that a large, nonconserved portion of Smd1p is dispensable for biological activity. These observations firmly establish D1 as an essential component of the cellular splicing apparatus and suggest that yeast and metazoa are remarkably similar in the polypeptides guiding early snRNP assembly.

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Year:  1993        PMID: 8346029      PMCID: PMC331451          DOI: 10.1093/nar/21.15.3501

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  Cap trimethylation of U snRNA is cytoplasmic and dependent on U snRNP protein binding.

Authors:  I W Mattaj
Journal:  Cell       Date:  1986-09-12       Impact factor: 41.582

2.  A protein associated with small nuclear ribonucleoprotein particles recognizes the 3' splice site of premessenger RNA.

Authors:  V Gerke; J A Steitz
Journal:  Cell       Date:  1986-12-26       Impact factor: 41.582

3.  Rapid and efficient site-specific mutagenesis without phenotypic selection.

Authors:  T A Kunkel; J D Roberts; R A Zakour
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

4.  An enhancer screen identifies a gene that encodes the yeast U1 snRNP A protein: implications for snRNP protein function in pre-mRNA splicing.

Authors:  X C Liao; J Tang; M Rosbash
Journal:  Genes Dev       Date:  1993-03       Impact factor: 11.361

5.  mRNA splicing efficiency in yeast and the contribution of nonconserved sequences.

Authors:  C W Pikielny; M Rosbash
Journal:  Cell       Date:  1985-05       Impact factor: 41.582

6.  Structural organization of ribonucleoproteins containing small nuclear RNAs from HeLa cells. Proteins interact closely with a similar structural domain of U1, U2, U4 and U5 small nuclear RNAs.

Authors:  J P Liautard; J Sri-Widada; C Brunel; P Jeanteur
Journal:  J Mol Biol       Date:  1982-12-15       Impact factor: 5.469

7.  Small nuclear ribonucleoprotein particle assembly in vivo: demonstration of a 6S RNA-free core precursor and posttranslational modification.

Authors:  D E Fisher; G E Conner; W H Reeves; R Wisniewolski; G Blobel
Journal:  Cell       Date:  1985-10       Impact factor: 41.582

8.  Structure and function of the yeast URA3 gene. Differentially regulated expression of hybrid beta-galactosidase from overlapping coding sequences in yeast.

Authors:  M Rose; D Botstein
Journal:  J Mol Biol       Date:  1983-11-15       Impact factor: 5.469

9.  A subset of yeast snRNA's contains functional binding sites for the highly conserved Sm antigen.

Authors:  N Riedel; S Wolin; C Guthrie
Journal:  Science       Date:  1987-01-16       Impact factor: 47.728

10.  A protein that specifically recognizes the 3' splice site of mammalian pre-mRNA introns is associated with a small nuclear ribonucleoprotein.

Authors:  J Tazi; C Alibert; J Temsamani; I Reveillaud; G Cathala; C Brunel; P Jeanteur
Journal:  Cell       Date:  1986-12-05       Impact factor: 41.582

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  13 in total

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Authors:  J Salgado-Garrido; E Bragado-Nilsson; S Kandels-Lewis; B Séraphin
Journal:  EMBO J       Date:  1999-06-15       Impact factor: 11.598

2.  Characterization of U6 snRNA-protein interactions.

Authors:  V P Vidal; L Verdone; A E Mayes; J D Beggs
Journal:  RNA       Date:  1999-11       Impact factor: 4.942

3.  Functional characterization of nuclear localization signals in yeast Sm proteins.

Authors:  R Bordonné
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

4.  Interactions within the yeast Sm core complex: from proteins to amino acids.

Authors:  A Camasses; E Bragado-Nilsson; R Martin; B Séraphin; R Bordonné
Journal:  Mol Cell Biol       Date:  1998-04       Impact factor: 4.272

5.  Transcriptional pulse-chase analysis reveals a role for a novel snRNP-associated protein in the manufacture of spliceosomal snRNPs.

Authors:  S M Noble; C Guthrie
Journal:  EMBO J       Date:  1996-08-15       Impact factor: 11.598

6.  Depletion of yeast RNase III blocks correct U2 3' end formation and results in polyadenylated but functional U2 snRNA.

Authors:  S Abou Elela; M Ares
Journal:  EMBO J       Date:  1998-07-01       Impact factor: 11.598

7.  Six novel genes necessary for pre-mRNA splicing in Saccharomyces cerevisiae.

Authors:  J R Maddock; J Roy; J L Woolford
Journal:  Nucleic Acids Res       Date:  1996-03-15       Impact factor: 16.971

8.  Structurally related but functionally distinct yeast Sm D core small nuclear ribonucleoprotein particle proteins.

Authors:  J Roy; B Zheng; B C Rymond; J L Woolford
Journal:  Mol Cell Biol       Date:  1995-01       Impact factor: 4.272

9.  cDNA cloning of the Sm proteins D2 and D3 from human small nuclear ribonucleoproteins: evidence for a direct D1-D2 interaction.

Authors:  T Lehmeier; V Raker; H Hermann; R Lührmann
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-06       Impact factor: 11.205

10.  Identification and characterization of Uss1p (Sdb23p): a novel U6 snRNA-associated protein with significant similarity to core proteins of small nuclear ribonucleoproteins.

Authors:  M Cooper; L H Johnston; J D Beggs
Journal:  EMBO J       Date:  1995-05-01       Impact factor: 11.598

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