Literature DB >> 3888403

mRNA splicing efficiency in yeast and the contribution of nonconserved sequences.

C W Pikielny, M Rosbash.   

Abstract

A simple kinetic model for mRNA splicing predicts the way in which in vivo steady state precursor RNA levels (P) and messenger RNA levels (M) vary as a function of the rate constant of the splicing reaction (ksp). The model points to M/P as the best measure of ksp. The analysis of a set of intron mutations in a yeast gene supports the general features of the model and shows that the splicing efficiency of transcripts containing the wild-type intron is well in excess of what is necessary to generate normal mRNA levels. The data also suggest that regions of the intron, in addition to the well-conserved consensus sequences, contribute to efficient splicing.

Entities:  

Mesh:

Substances:

Year:  1985        PMID: 3888403     DOI: 10.1016/0092-8674(85)90066-2

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  89 in total

1.  Influence of specific mutations on the thermal stability of the td group I intron in vitro and on its splicing efficiency in vivo: a comparative study.

Authors:  P Brion; R Schroeder; F Michel; E Westhof
Journal:  RNA       Date:  1999-07       Impact factor: 4.942

2.  Interaction of the U1 snRNP with nonconserved intronic sequences affects 5' splice site selection.

Authors:  O Puig; A Gottschalk; P Fabrizio; B Séraphin
Journal:  Genes Dev       Date:  1999-03-01       Impact factor: 11.361

3.  Genetic interactions between the 5' and 3' splice site consensus sequences and U6 snRNA during the second catalytic step of pre-mRNA splicing.

Authors:  C A Collins; C Guthrie
Journal:  RNA       Date:  2001-12       Impact factor: 4.942

4.  Activation of a cryptic 5' splice site by U1 snRNA.

Authors:  C J Alvarez; J A Wise
Journal:  RNA       Date:  2001-03       Impact factor: 4.942

5.  Identification of novel Saccharomyces cerevisiae proteins with nuclear export activity: cell cycle-regulated transcription factor ace2p shows cell cycle-independent nucleocytoplasmic shuttling.

Authors:  T H Jensen; M Neville; J C Rain; T McCarthy; P Legrain; M Rosbash
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

6.  Evidence for splice site pairing via intron definition in Schizosaccharomyces pombe.

Authors:  C M Romfo; C J Alvarez; W J van Heeckeren; C J Webb; J A Wise
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

7.  High-affinity binding site for a group II intron-encoded reverse transcriptase/maturase within a stem-loop structure in the intron RNA.

Authors:  Kazuo Watanabe; Alan M Lambowitz
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

8.  Identification of cis-acting intron and exon regions in influenza virus NS1 mRNA that inhibit splicing and cause the formation of aberrantly sedimenting presplicing complexes.

Authors:  M E Nemeroff; U Utans; A Krämer; R M Krug
Journal:  Mol Cell Biol       Date:  1992-03       Impact factor: 4.272

9.  Inhibition of a spliceosome turnover pathway suppresses splicing defects.

Authors:  Shatakshi Pandit; Bert Lynn; Brian C Rymond
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-31       Impact factor: 11.205

10.  Compensatory evolution of a precursor messenger RNA secondary structure in the Drosophila melanogaster Adh gene.

Authors:  Ying Chen; Wolfgang Stephan
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-12       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.