Literature DB >> 8328918

The nucleotide sequence of the coat protein genes and 3' non-coding regions of two resistance-breaking tobamoviruses in pepper shows that they are different viruses.

I García-Luque1, M L Ferrero, J M Rodríquez, E Alonso, A de la Cruz, A I Sanz, C Vaquero, M T Serra, J R Díaz-Ruíz.   

Abstract

The nucleotide sequence of the coat protein genes and 3' non-coding regions of two different resistance-breaking tobamoviruses in pepper have been determined. The deduced coat protein of an Italian isolate of pepper mild mottle virus (PMMV-I) consists of 156 amino acids and its 3' non-coding region is 198 nucleotides long. They have been found to be very similar in sequence and structure to those previously reported for a Spanish isolate (PMMV-S). In contrast, a Dutch isolate termed P 11 codes for a coat protein of 160 amino acids and its 3' non-coding region is 291 nucleotides long, which may have arisen by duplication. The nucleotide and the predicted coat protein amino acid sequence analysis show that this isolate should be considered as a new virus within the tobamovirus group. The term paprika mild mottle virus (PaMMV) is proposed.

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Year:  1993        PMID： 8328918      PMCID： PMC7086834          DOI： 10.1007/bf01379081

Source DB:  PubMed          Journal:  Arch Virol        ISSN： 0304-8608            Impact factor:   2.574


  39 in total

1.  A classification of the tobamoviruses based on comparisons among their 126K proteins.

Authors:  A Fraile; F García-Arenal
Journal:  J Gen Virol       Date:  1990-10       Impact factor: 3.891

2.  Prediction of RNA secondary structure, including pseudoknotting, by computer simulation.

Authors:  J P Abrahams; M van den Berg; E van Batenburg; C Pleij
Journal:  Nucleic Acids Res       Date:  1990-05-25       Impact factor: 16.971

3.  Fast and sensitive multiple sequence alignments on a microcomputer.

Authors:  D G Higgins; P M Sharp
Journal:  Comput Appl Biosci       Date:  1989-04

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  A simple and very efficient method for generating cDNA libraries.

Authors:  U Gubler; B J Hoffman
Journal:  Gene       Date:  1983-11       Impact factor: 3.688

6.  Similarities among plant virus (+) and (-) RNA termini imply a common ancestry with promoters of eukaryotic tRNAs.

Authors:  L E Marsh; G P Pogue; T C Hall
Journal:  Virology       Date:  1989-10       Impact factor: 3.616

7.  The complete nucleotide sequence of tobacco rattle virus RNA-1.

Authors:  W D Hamilton; M Boccara; D J Robinson; D C Baulcombe
Journal:  J Gen Virol       Date:  1987-10       Impact factor: 3.891

8.  Sequence of cowpea chlorotic mottle virus RNAs 2 and 3 and evidence of a recombination event during bromovirus evolution.

Authors:  R F Allison; M Janda; P Ahlquist
Journal:  Virology       Date:  1989-09       Impact factor: 3.616

9.  Recombination between satellite RNAs of turnip crinkle virus.

Authors:  P J Cascone; C D Carpenter; X H Li; A E Simon
Journal:  EMBO J       Date:  1990-06       Impact factor: 11.598

10.  Modulation of replication, aminoacylation and adenylation in vitro and infectivity in vivo of BMV RNAs containing deletions within the multifunctional 3' end.

Authors:  J J Bujarski; P Ahlquist; T C Hall; T W Dreher; P Kaesberg
Journal:  EMBO J       Date:  1986-08       Impact factor: 11.598
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  6 in total

1.  Accumulation kinetics of CMV RNA 3-encoded proteins and subcellular localization of the 3a protein in infected and transgenic tobacco plants.

Authors:  C Vaquero; A I Sanz; M T Serra; I García-Luque
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

2.  A local strain of Paprika mild mottle virus breaks L3 resistance in peppers and is accelerated in Tomato brown rugose fruit virus-infected Tm-22-resistant tomatoes.

Authors:  Neta Luria; Elisheva Smith; Noa Sela; Oded Lachman; Ilana Bekelman; Amnon Koren; Aviv Dombrovsky
Journal:  Virus Genes       Date:  2018-02-10       Impact factor: 2.332

Review 3.  Pepper mild mottle virus: A plant pathogen with a greater purpose in (waste)water treatment development and public health management.

Authors:  E M Symonds; Karena H Nguyen; V J Harwood; M Breitbart
Journal:  Water Res       Date:  2018-06-30       Impact factor: 11.236

4.  Nucleotide sequence of Chinese rape mosaic virus (oilseed rape mosaic virus), a crucifer tobamovirus infectious on Arabidopsis thaliana.

Authors:  I Aguilar; F Sánchez; A Martin Martin; D Martinez-Herrera; F Ponz
Journal:  Plant Mol Biol       Date:  1996-01       Impact factor: 4.076

5.  Transcriptome profiling of pepper leaves by RNA-Seq during an incompatible and a compatible pepper-tobamovirus interaction.

Authors:  Balázs Kalapos; Csilla Juhász; Eszter Balogh; Gábor Kocsy; István Tóbiás; Gábor Gullner
Journal:  Sci Rep       Date:  2021-10-19       Impact factor: 4.379

6.  Fine mapping and DNA fiber FISH analysis locates the tobamovirus resistance gene L3 of Capsicum chinense in a 400-kb region of R-like genes cluster embedded in highly repetitive sequences.

Authors:  R Tomita; J Murai; Y Miura; H Ishihara; S Liu; Y Kubotera; A Honda; R Hatta; T Kuroda; H Hamada; M Sakamoto; I Munemura; O Nunomura; K Ishikawa; Y Genda; S Kawasaki; K Suzuki; K Meksem; K Kobayashi
Journal:  Theor Appl Genet       Date:  2008-07-29       Impact factor: 5.699
  6 in total

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