Literature DB >> 8314982

Detection of Mycobacterium tuberculosis in sputum samples by polymerase chain reaction using a simplified procedure.

T Kocagöz1, E Yilmaz, S Ozkara, S Kocagöz, M Hayran, M Sachedeva, H F Chambers.   

Abstract

A repetitive sequence of Mycobacterium tuberculosis DNA was amplified by polymerase chain reaction (PCR), from sputum samples, for the diagnosis of pulmonary tuberculosis. The method of heating the sample in a boiling water bath to break down the bacterial cell wall and to release the DNA was compared with that of enzymatic lysis of bacteria and then phenol-chloroform extraction of DNA. Heating the sample was the better method with a sensitivity of approximately 10 microorganisms. A total of 78 sputum specimens prepared by heating were examined by PCR, and the results were compared with the results of acid-fast stained smears, cultures, and clinical data. M. tuberculosis was detected by PCR in all smear- and culture-positive and smear-negative, culture-positive cases. Additionally, PCR was capable of detecting four of nine cases which were smear and culture negative but clinically suspected of tuberculosis. DNA amplification by PCR is a sensitive and specific method for the diagnosis of tuberculosis, and with this simplified DNA isolation procedure it can be used in routine clinical practice.

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Year:  1993        PMID: 8314982      PMCID: PMC265557          DOI: 10.1128/jcm.31.6.1435-1438.1993

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  15 in total

1.  Polymerase chain reaction amplification of a repetitive DNA sequence specific for Mycobacterium tuberculosis.

Authors:  K D Eisenach; M D Cave; J H Bates; J T Crawford
Journal:  J Infect Dis       Date:  1990-05       Impact factor: 5.226

2.  Sequence analysis and amplification by polymerase chain reaction of a cloned DNA fragment for identification of Mycobacterium tuberculosis.

Authors:  R J Patel; J W Fries; W F Piessens; D F Wirth
Journal:  J Clin Microbiol       Date:  1990-03       Impact factor: 5.948

3.  Rapid diagnosis of tuberculosis by amplification of mycobacterial DNA in clinical samples.

Authors:  A Brisson-Noël; B Gicquel; D Lecossier; V Lévy-Frébault; X Nassif; A J Hance
Journal:  Lancet       Date:  1989-11-04       Impact factor: 79.321

Review 4.  Polymerase chain reaction.

Authors:  G Schochetman; C Y Ou; W K Jones
Journal:  J Infect Dis       Date:  1988-12       Impact factor: 5.226

5.  Specific detection of Mycobacterium tuberculosis complex strains by polymerase chain reaction.

Authors:  P W Hermans; A R Schuitema; D Van Soolingen; C P Verstynen; E M Bik; J E Thole; A H Kolk; J D van Embden
Journal:  J Clin Microbiol       Date:  1990-06       Impact factor: 5.948

6.  Amplification of a species-specific DNA fragment of Mycobacterium tuberculosis and its possible use in diagnosis.

Authors:  P Del Portillo; L A Murillo; M E Patarroyo
Journal:  J Clin Microbiol       Date:  1991-10       Impact factor: 5.948

7.  Detection of Mycobacterium tuberculosis in sputum samples using a polymerase chain reaction.

Authors:  K D Eisenach; M D Sifford; M D Cave; J H Bates; J T Crawford
Journal:  Am Rev Respir Dis       Date:  1991-11

8.  Use of a reamplification protocol improves sensitivity of detection of Mycobacterium tuberculosis in clinical samples by amplification of DNA.

Authors:  C Pierre; D Lecossier; Y Boussougant; D Bocart; V Joly; P Yeni; A J Hance
Journal:  J Clin Microbiol       Date:  1991-04       Impact factor: 5.948

9.  A simple method for diagnosing M. tuberculosis infection in clinical samples using PCR.

Authors:  V Sritharan; R H Barker
Journal:  Mol Cell Probes       Date:  1991-10       Impact factor: 2.365

10.  Identification of mycobacteria from culture by using the Gen-Probe Rapid Diagnostic System for Mycobacterium avium complex and Mycobacterium tuberculosis complex.

Authors:  C E Musial; L S Tice; L Stockman; G D Roberts
Journal:  J Clin Microbiol       Date:  1988-10       Impact factor: 5.948

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  34 in total

1.  Single-tube balanced heminested PCR for detecting Mycobacterium tuberculosis in smear-negative samples.

Authors:  A García-Quintanilla; L Garcia; G Tudó; M Navarro; J González; M T Jiménez de Anta
Journal:  J Clin Microbiol       Date:  2000-03       Impact factor: 5.948

2.  Rapid detection of rifampin resistance in Mycobacterium tuberculosis isolates by heteroduplex analysis and determination of rifamycin cross-resistance in rifampin-resistant isolates.

Authors:  Zeynep Saribaş; Tanil Kocagöz; Alpaslan Alp; Ayfer Günalp
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

3.  A molecular approach to identification and profiling of first-line-drug-resistant mycobacteria from sputum of pulmonary tuberculosis patients.

Authors:  Imran Hussain Chowdhury; Aditi Sen; Bojlul Bahar; Avijit Hazra; Urmita Chakraborty; Subhadip Choudhuri; Avranil Goswami; Nishith Kumar Pal; Basudev Bhattacharya
Journal:  J Clin Microbiol       Date:  2012-03-29       Impact factor: 5.948

4.  Novel multipurpose methodology for detection of mycobacteria in pulmonary and extrapulmonary specimens by smear microscopy, culture, and PCR.

Authors:  Soumitesh Chakravorty; Jaya Sivaswami Tyagi
Journal:  J Clin Microbiol       Date:  2005-06       Impact factor: 5.948

5.  Rapid determination of rifampin resistance in clinical isolates of Mycobacterium tuberculosis by real-time PCR.

Authors:  Tanil Kocagoz; Zeynep Saribas; Alpaslan Alp
Journal:  J Clin Microbiol       Date:  2005-12       Impact factor: 5.948

6.  Multiprimer PCR system diagnosis of pulmonary tuberculosis in Cochabamba, Bolivia.

Authors:  Rudy Parrado; Daniel Lozano; Lineth Garcia; Mary Cruz Torrico; Raúl Delgado; Faustino Torrico; Monica Laserna; Richard Reithinger
Journal:  J Clin Microbiol       Date:  2007-12-12       Impact factor: 5.948

7.  Simple Identification of Mycobacterial Species by Sequence-Specific Multiple Polymerase Chain Reactions.

Authors:  Nihan Unubol; Inci Tuney Kizilkaya; Sinem Oktem Okullu; Kaya Koksalan; Tanil Kocagoz
Journal:  Curr Microbiol       Date:  2019-05-09       Impact factor: 2.188

8.  Detection of Mycobacterium tuberculosis in respiratory specimens by strand displacement amplification of DNA.

Authors:  J A Down; M A O'Connell; M S Dey; A H Walters; D R Howard; M C Little; W E Keating; P Zwadyk; P D Haaland; D A McLaurin; G Cole
Journal:  J Clin Microbiol       Date:  1996-04       Impact factor: 5.948

9.  Preparation of mycobacterial DNA from blood culture fluids by simple alkali wash and heat lysis method for PCR detection.

Authors:  J K Kulski; T Pryce
Journal:  J Clin Microbiol       Date:  1996-08       Impact factor: 5.948

10.  Assessment by meta-analysis of PCR for diagnosis of smear-negative pulmonary tuberculosis.

Authors:  Olga L Sarmiento; Kristen A Weigle; Janet Alexander; David J Weber; William C Miller
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

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