Literature DB >> 8308102

Establishment of a quality assurance program for human immunodeficiency virus type 1 DNA polymerase chain reaction assays by the AIDS Clinical Trials Group. ACTG PCR Working Group, and the ACTG PCR Virology Laboratories.

J B Jackson1, J Drew, H J Lin, P Otto, J W Bremer, F B Hollinger, S M Wolinsky.   

Abstract

An independent quality assurance program has been established by the Virology Committee of the AIDS Clinical Trials Group in the Division of AIDS, National Institute of Allergy and Infectious Diseases, for monitoring polymerase chain reaction (PCR) assays for human immunodeficiency virus type 1 (HIV-1) DNA that are performed by 11 laboratories participating in multicenter clinical trials in the United States. To perform HIV-1 DNA PCR for patients in AIDS Clinical Trials Group protocols, each laboratory was initially certified by correctly testing a coded certification panel consisting of eight well-defined clinical whole-blood specimens and 30 cell pellets containing 0, 2, 5, 10, 20, or 50 8E5/LAV cells per 125,000 uninfected peripheral blood mononuclear cells. PCR was performed by one of two standardized commercial assays for amplification and nonisotopic detection of HIV-1 proviral DNA. For continuing certification, each laboratory must correctly test eight coded whole-blood samples per quarter and run three or four coded cell pellets and HIV-1 DNA copy standards with every PCR assay in real time. The PCR results for the coded pellets on each run are entered into an encrypted computer file, which immediately assesses the validity of the run. To date, 10 of 11 laboratories have correctly tested all HIV-1-positive and -negative samples in the initial certification panel on their first or second attempt. Subsequently, 9 of these 11 laboratories have continued to maintain their certified status. The use of commercial HIV-1 DNA PCR assays and an external quality assurance program have ensured that results from different laboratories are comparable and that problems with sensitivity and specificity are quickly identified.

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Year:  1993        PMID: 8308102      PMCID: PMC266362          DOI: 10.1128/jcm.31.12.3123-3128.1993

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  13 in total

1.  Detection of HIV in specimens from newborn screening programs.

Authors:  A M Comeau; H W Hsu; M Schwerzler; G Mushinsky; G F Grady
Journal:  N Engl J Med       Date:  1992-06-18       Impact factor: 91.245

2.  Rapid and quantitative detection of enzymatically amplified HIV-1 DNA using chemiluminescent oligonucleotide probes.

Authors:  C Y Ou; S H McDonough; D Cabanas; T B Ryder; M Harper; J Moore; G Schochetman
Journal:  AIDS Res Hum Retroviruses       Date:  1990-11       Impact factor: 2.205

3.  Comparison of three nonradioisotopic polymerase chain reaction-based methods for detection of human immunodeficiency virus type 1.

Authors:  A J Whetsell; J B Drew; G Milman; R Hoff; E A Dragon; K Adler; J Hui; P Otto; P Gupta; H Farzadegan
Journal:  J Clin Microbiol       Date:  1992-04       Impact factor: 5.948

4.  Avoiding false positives with PCR.

Authors:  S Kwok; R Higuchi
Journal:  Nature       Date:  1989-05-18       Impact factor: 49.962

5.  Use of uracil DNA glycosylase to control carry-over contamination in polymerase chain reactions.

Authors:  M C Longo; M S Berninger; J L Hartley
Journal:  Gene       Date:  1990-09-01       Impact factor: 3.688

6.  Standardization of sensitive human immunodeficiency virus coculture procedures and establishment of a multicenter quality assurance program for the AIDS Clinical Trials Group. The NIH/NIAID/DAIDS/ACTG Virology Laboratories.

Authors:  F B Hollinger; J W Bremer; L E Myers; J W Gold; L McQuay
Journal:  J Clin Microbiol       Date:  1992-07       Impact factor: 5.948

7.  Vertical transmission of HIV-1: lack of detectable virus in peripheral blood cells of infected children at birth.

Authors:  A De Rossi; L Ometto; F Mammano; C Zanotto; C Giaquinto; L Chieco-Bianchi
Journal:  AIDS       Date:  1992-10       Impact factor: 4.177

8.  Non-isotopic polymerase chain reaction methods for the detection of HIV-1 in Ugandan mothers and infants.

Authors:  J B Jackson; C Ndugwa; F Mmiro; P Kataaha; L Guay; E A Dragon; J Goldfarb; K Olness
Journal:  AIDS       Date:  1991-12       Impact factor: 4.177

9.  A multicenter proficiency trial of gene amplification (PCR) for the detection of HIV-1.

Authors:  H W Sheppard; M S Ascher; M P Busch; P R Sohmer; M Stanley; M C Luce; J A Chimera; R Madej; G C Rodgers; C Lynch
Journal:  J Acquir Immune Defic Syndr (1988)       Date:  1991

10.  Biological and biochemical characterization of a cloned Leu-3- cell surviving infection with the acquired immune deficiency syndrome retrovirus.

Authors:  T M Folks; D Powell; M Lightfoote; S Koenig; A S Fauci; S Benn; A Rabson; D Daugherty; H E Gendelman; M D Hoggan
Journal:  J Exp Med       Date:  1986-07-01       Impact factor: 14.307

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  26 in total

1.  Multicenter quality assessment of PCR methods for detection of enteroviruses.

Authors:  P Muir; A Ras; P E Klapper; G M Cleator; K Korn; C Aepinus; A Fomsgaard; P Palmer; A Samuelsson; A Tenorio; B Weissbrich; A M van Loon
Journal:  J Clin Microbiol       Date:  1999-05       Impact factor: 5.948

2.  Results of a quality assurance program for detection of cytomegalovirus infection in the pediatric pulmonary and cardiovascular complications of vertically transmitted human immunodeficiency virus infection study.

Authors:  G J Demmler; A Istas; K A Easley; A Kovacs
Journal:  J Clin Microbiol       Date:  2000-11       Impact factor: 5.948

3.  Generation of HIV-1-specific CD8+ cell responses following allogeneic hematopoietic cell transplantation.

Authors:  Ann E Woolfrey; Uma Malhotra; Robert D Harrington; John McNevin; Thomas J Manley; Stanley R Riddell; Robert W Coombs; Frederick R Appelbaum; Larry Corey; Rainer Storb
Journal:  Blood       Date:  2008-08-12       Impact factor: 22.113

4.  Delayed HIV detection among infants exposed to postnatal antiretroviral prophylaxis during breastfeeding.

Authors:  Caroline C King; Athena P Kourtis; Deborah Persaud; Julie A E Nelson; Carrie Ziemniak; Michael G Hudgens; Gerald Tegha; Charles S Chasela; Denise J Jamieson; Charles M van der Horst
Journal:  AIDS       Date:  2015-09-24       Impact factor: 4.177

5.  A comprehensive evaluation of the proficiency testing program for the HIV-1 BED incidence assay.

Authors:  Trudy Dobbs; Xin Liu; Rebecca Anderson; John Nkengasong; Bharat S Parekh
Journal:  J Clin Microbiol       Date:  2011-08-10       Impact factor: 5.948

Review 6.  Molecular typing of enteroviruses: current status and future requirements. The European Union Concerted Action on Virus Meningitis and Encephalitis.

Authors:  P Muir; U Kämmerer; K Korn; M N Mulders; T Pöyry; B Weissbrich; R Kandolf; G M Cleator; A M van Loon
Journal:  Clin Microbiol Rev       Date:  1998-01       Impact factor: 26.132

7.  A three-center European external quality control study of PCR for detection of cytomegalovirus DNA in blood.

Authors:  J E Grundy; A Ehrnst; H Einsele; V C Emery; H Hebart; H G Prentice; P Ljungman
Journal:  J Clin Microbiol       Date:  1996-05       Impact factor: 5.948

8.  Assessment of hepatitis B virus DNA stability in serum by the Chiron Quantiplex branched-DNA assay.

Authors:  M Krajden; L Comanor; O Rifkin; A Grigoriew; J M Minor; G F Kapke
Journal:  J Clin Microbiol       Date:  1998-02       Impact factor: 5.948

9.  Stability of human immunodeficiency virus type 1 proviral DNA in whole-blood samples.

Authors:  Cheryl Jennings; Aleksandra Danilovic; Salvatore Scianna; Donald J Brambilla; James W Bremer
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

10.  Impact of proficiency testing program for laboratories conducting early diagnosis of HIV-1 infection in infants in low- to middle-income countries.

Authors:  Albert Garcia; Shambavi Subbarao; Guoqing Zhang; Linda Parsons; John Nkengasong; Chin-Yih Ou; Dennis Ellenberger
Journal:  J Clin Microbiol       Date:  2013-12-18       Impact factor: 5.948

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