Literature DB >> 8307680

Effect of secondary structure on the rate of deamidation of several growth hormone releasing factor analogs.

C L Stevenson1, A R Friedman, T M Kubiak, M E Donlan, R T Borchardt.   

Abstract

The objective of this study was to determine whether the rates of deamidation of Asn8 in selected growth hormone releasing factor (GRF) analogs were related to the peptide's secondary structures in solution. Bovine or human [Leu27]GRF(1-32)NH2 (both having Gly at position 15), [Ala15Leu27]bGRF(1-32)NH2 and [Pro15Leu27]bGRF(1-32)NH2 were used as model peptides. The peptide helical content (assessed by CD) increased with the increasing methanol concentration and was as follows: 7, 12 and 18% in 0% MeOH; 24, 48 and 52% in 40% MeOH; and 41, 77 and 81% in 80% MeOH for Pro15Leu27 bGRF(1-32)NH2, [Leu27]hGRF(1-32)NH2 and Ala15Leu27 bGRF(1-32)NH2, respectively. 2D NMR studies done in the presence of 40% CD3OH indicated more helical structure for the Ala15 analog as compared to [Leu27]hGRF(1-32)NH2. In both these peptides Asn8 was included in the helical region. In contrast, the lack of conformational information for the Pro15 analog indicated little helical structure around Asn8. The peptides' deamidation rates decreased and their half-lives increased with increasing MeOH concentrations. At 40% MeOH, the least helical Pro15 bGRF analog (t1/2 = 10.78 h) deamidated 1.5 and 2 times faster than its Gly15 (t1/2 = 15.74 h) and Ala15 (t1/2 = 21.53 h) counterparts, respectively. This study indicates that helical environment around Asn8 in GRF makes this residue less prone to deamidation.

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Year:  1993        PMID: 8307680     DOI: 10.1111/j.1399-3011.1993.tb00356.x

Source DB:  PubMed          Journal:  Int J Pept Protein Res        ISSN: 0367-8377


  6 in total

1.  The effects of alpha-helix on the stability of Asn residues: deamidation rates in peptides of varying helicity.

Authors:  A A Kosky; U O Razzaq; M J Treuheit; D N Brems
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

2.  Multivariate analysis of the sequence dependence of asparagine deamidation rates in peptides.

Authors:  Andrew A Kosky; Vasumathi Dharmavaram; Gayathri Ratnaswamy; Mark Cornell Manning
Journal:  Pharm Res       Date:  2009-09-09       Impact factor: 4.200

Review 3.  Predicting protein decomposition: the case of aspartic-acid racemization kinetics.

Authors:  M J Collins; E R Waite; A C van Duin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1999-01-29       Impact factor: 6.237

4.  Virus-specific interaction between the human cytomegalovirus major capsid protein and the C terminus of the assembly protein precursor.

Authors:  M Beaudet-Miller; R Zhang; J Durkin; W Gibson; A D Kwong; Z Hong
Journal:  J Virol       Date:  1996-11       Impact factor: 5.103

5.  Optimization of lyophilization conditions for recombinant human interleukin-2 by dried-state conformational analysis using Fourier-transform infrared spectroscopy.

Authors:  S J Prestrelski; K A Pikal; T Arakawa
Journal:  Pharm Res       Date:  1995-09       Impact factor: 4.200

6.  Characterization of Asparagine Deamidation in Immunodominant Myelin Oligodendrocyte Glycoprotein Peptide Potential Immunotherapy for the Treatment of Multiple Sclerosis.

Authors:  Maria-Eleni Androutsou; Agathi Nteli; Areti Gkika; Maria Avloniti; Anastasia Dagkonaki; Lesley Probert; Theodore Tselios; Simona Golič Grdadolnik
Journal:  Int J Mol Sci       Date:  2020-10-13       Impact factor: 5.923

  6 in total

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