Literature DB >> 8278359

Spermidine deficiency increases +1 ribosomal frameshifting efficiency and inhibits Ty1 retrotransposition in Saccharomyces cerevisiae.

D Balasundaram1, J D Dinman, R B Wickner, C W Tabor, H Tabor.   

Abstract

Polyamines have been implicated in nucleic acid-related functions and in protein biosynthesis. RNA sequences that specifically direct ribosomes to shift reading frame in the -1 and +1 directions may be used to probe the mechanisms controlling translational fidelity. We examined the effects of spermidine on translational fidelity by an in vivo assay in which changes in beta-galactosidase activity are dependent on yeast retrovirus Ty +1 and yeast double-stranded RNA virus L-A -1 ribosomal frameshifting signals. In spe2 delta mutants of Saccharomyces cerevisiae, which cannot make spermidine as a result of a deletion in the SPE2 gene, there is a marked elevation in +1 but no change in -1 ribosomal frameshifting. The increase in +1 ribosomal frameshifting efficiency is accompanied by a striking decrease in Ty1 retrotransposition.

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Year:  1994        PMID: 8278359      PMCID: PMC42908          DOI: 10.1073/pnas.91.1.172

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

1.  Recoding: reprogrammed genetic decoding.

Authors:  R F Gesteland; R B Weiss; J F Atkins
Journal:  Science       Date:  1992-09-18       Impact factor: 47.728

Review 2.  Synonymous codon usage in Saccharomyces cerevisiae.

Authors:  P M Sharp; E Cowe
Journal:  Yeast       Date:  1991-10       Impact factor: 3.239

Review 3.  Translational suppression in gene expression in retroviruses and retrotransposons.

Authors:  T Jacks
Journal:  Curr Top Microbiol Immunol       Date:  1990       Impact factor: 4.291

4.  4-Thiouridine and the conformation of E. coli tRNA induced by spermidine.

Authors:  F Pochon; S S Cohen
Journal:  Biochem Biophys Res Commun       Date:  1972-05-26       Impact factor: 3.575

5.  Aminoacyl transfer RNA formation. I. Absence of pyrophosphate-ATP exchange in aminoacyl-tRNA formation stimulated by polyamines.

Authors:  K Igarashi; K Matsuzaki; Y Takeda
Journal:  Biochim Biophys Acta       Date:  1971-11-29

6.  Correlation between the abundance of yeast transfer RNAs and the occurrence of the respective codons in protein genes. Differences in synonymous codon choice patterns of yeast and Escherichia coli with reference to the abundance of isoaccepting transfer RNAs.

Authors:  T Ikemura
Journal:  J Mol Biol       Date:  1982-07-15       Impact factor: 5.469

7.  Localized mutagenesis and evidence for post-transcriptional regulation of MAK3. A putative N-acetyltransferase required for double-stranded RNA virus propagation in Saccharomyces cerevisiae.

Authors:  J C Tercero; L E Riles; R B Wickner
Journal:  J Biol Chem       Date:  1992-10-05       Impact factor: 5.157

8.  Polyamine requirement for efficient translation of amber codons in vivo.

Authors:  H Tabor; C W Tabor
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

9.  Ribosomal frameshifting in the yeast retrotransposon Ty: tRNAs induce slippage on a 7 nucleotide minimal site.

Authors:  M F Belcourt; P J Farabaugh
Journal:  Cell       Date:  1990-07-27       Impact factor: 41.582

10.  Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region.

Authors:  T Jacks; H D Madhani; F R Masiarz; H E Varmus
Journal:  Cell       Date:  1988-11-04       Impact factor: 41.582

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  32 in total

1.  Kinetics of ribosomal pausing during programmed -1 translational frameshifting.

Authors:  J D Lopinski; J D Dinman; J A Bruenn
Journal:  Mol Cell Biol       Date:  2000-02       Impact factor: 4.272

2.  Ribosomal protein L5 helps anchor peptidyl-tRNA to the P-site in Saccharomyces cerevisiae.

Authors:  A Meskauskas; J D Dinman
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

3.  Sensitivity of spermidine-deficient Saccharomyces cerevisiae to paromomycin.

Authors:  D Balasundaram; C W Tabor; H Tabor
Journal:  Antimicrob Agents Chemother       Date:  1999-05       Impact factor: 5.191

4.  Achieving a golden mean: mechanisms by which coronaviruses ensure synthesis of the correct stoichiometric ratios of viral proteins.

Authors:  Ewan P Plant; Rasa Rakauskaite; Deborah R Taylor; Jonathan D Dinman
Journal:  J Virol       Date:  2010-02-17       Impact factor: 5.103

Review 5.  A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment.

Authors:  John F Atkins; Glenn R Björk
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

Review 6.  Programmed translational frameshifting.

Authors:  P J Farabaugh
Journal:  Microbiol Rev       Date:  1996-03

Review 7.  Double-stranded RNA viruses of Saccharomyces cerevisiae.

Authors:  R B Wickner
Journal:  Microbiol Rev       Date:  1996-03

8.  SPE1 and SPE2: two essential genes in the biosynthesis of polyamines that modulate +1 ribosomal frameshifting in Saccharomyces cerevisiae.

Authors:  D Balasundaram; J D Dinman; C W Tabor; H Tabor
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

9.  Spe3, which encodes spermidine synthase, is required for full repression through NRE(DIT) in Saccharomyces cerevisiae.

Authors:  H Friesen; J C Tanny; J Segall
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

10.  Decreased peptidyltransferase activity correlates with increased programmed -1 ribosomal frameshifting and viral maintenance defects in the yeast Saccharomyces cerevisiae.

Authors:  Arturas Meskauskas; Jason W Harger; Kristi L Muldoon Jacobs; Jonathan D Dinman
Journal:  RNA       Date:  2003-08       Impact factor: 4.942

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