Literature DB >> 8277947

RNA editing of a conserved reading frame in plant mitochondria increases its similarity to two overlapping reading frames in Escherichia coli.

S Sünkel1, A Brennicke, V Knoop.   

Abstract

An open reading frame (orfx) in mitochondria of the higher plants Oenothera berteriana and Arabidopsis thaliana is homologous to orf244 in the mitochondrial genome of Marchantia polymorpha. Homologous sequences are also present in carrot, potato and sugar beet. Profile analysis revealed similarity to two overlapping reading frames in the Escherichia coli genome. Potential translation initiation at conserved ATA (isoleucine) and TTG (leucine) codons is discussed. Transcripts of the open reading frame are altered by RNA editing in Arabidopsis and Oenothera downstream of these codons, suggesting this to be the functionally important region.

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Year:  1994        PMID： 8277947     DOI： 10.1007/bf00277349

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN： 0026-8925


  22 in total

Review 1.  Regenerating good sense: RNA editing and trans splicing in plant mitochondria.

Authors:  B Wissinger; A Brennicke; W Schuster
Journal:  Trends Genet       Date:  1992-09       Impact factor: 11.639

2.  RNA editing in plant mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

3.  Direct protein sequencing of wheat mitochondrial ATP synthase subunit 9 confirms RNA editing in plants.

Authors:  P V Graves; D Bégu; J Velours; E Neau; F Belloc; S Litvak; A Araya
Journal:  J Mol Biol       Date:  1990-07-05       Impact factor: 5.469

4.  RNA editing in plant mitochondria.

Authors:  R Hiesel; B Wissinger; W Schuster; A Brennicke
Journal:  Science       Date:  1989-12-22       Impact factor: 47.728

5.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

6.  Profile analysis: detection of distantly related proteins.

Authors:  M Gribskov; A D McLachlan; D Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

7.  Hybridization probe size control: optimized 'oligolabelling'.

Authors:  C P Hodgson; R Z Fisk
Journal:  Nucleic Acids Res       Date:  1987-08-11       Impact factor: 16.971

8.  Plant mitochondrial DNA evolves rapidly in structure, but slowly in sequence.

Authors:  J D Palmer; L A Herbon
Journal:  J Mol Evol       Date:  1988 Dec-1989 Feb       Impact factor: 2.395

9.  RNA editing makes mistakes in plant mitochondria: editing loses sense in transcripts of a rps19 pseudogene and in creating stop codons in coxI and rps3 mRNAs of Oenothera.

Authors:  W Schuster; A Brennicke
Journal:  Nucleic Acids Res       Date:  1991-12-25       Impact factor: 16.971

10.  Trans splicing integrates an exon of 22 nucleotides into the nad5 mRNA in higher plant mitochondria.

Authors:  V Knoop; W Schuster; B Wissinger; A Brennicke
Journal:  EMBO J       Date:  1991-11       Impact factor: 11.598
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  6 in total

1.  Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris.

Authors:  Jeffrey P Mower; Jeffrey D Palmer
Journal:  Mol Genet Genomics       Date:  2006-07-22       Impact factor: 3.291

2.  RNA editing in Arabidopsis mitochondria effects 441 C to U changes in ORFs.

Authors:  P Giegé; A Brennicke
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

3.  Biological and Molecular Characterization of Chenopodium quinoa Mitovirus 1 Reveals a Distinct Small RNA Response Compared to Those of Cytoplasmic RNA Viruses.

Authors:  L Nerva; G Vigani; D Di Silvestre; M Ciuffo; M Forgia; W Chitarra; M Turina
Journal:  J Virol       Date:  2019-03-21       Impact factor: 5.103

4.  A ribosomal protein L2 gene is transcribed, spliced, and edited at one site in rice mitochondria.

Authors:  N Kubo; K Ozawa; T Hino; K Kadowaki
Journal:  Plant Mol Biol       Date:  1996-07       Impact factor: 4.076

5.  Transcript mapping and processing of mitochondrial RNA in the chlorophyte alga Prototheca wickerhamii.

Authors:  G Wolff; U Kück
Journal:  Plant Mol Biol       Date:  1996-02       Impact factor: 4.076

6.  Evidence against equimolarity of large repeat arrangements and a predominant master circle structure of the mitochondrial genome from a monkeyflower (Mimulus guttatus) lineage with cryptic CMS.

Authors:  Jeffrey P Mower; Andrea L Case; Eric R Floro; John H Willis
Journal:  Genome Biol Evol       Date:  2012-04-25       Impact factor: 3.416
  6 in total

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