Literature DB >> 1762921

RNA editing makes mistakes in plant mitochondria: editing loses sense in transcripts of a rps19 pseudogene and in creating stop codons in coxI and rps3 mRNAs of Oenothera.

W Schuster1, A Brennicke.   

Abstract

An intact gene for the ribosomal protein S19 (rps19) is absent from Oenothera mitochondria. The conserved rps19 reading frame found in the mitochondrial genome is interrupted by a termination codon. This rps19 pseudogene is cotranscribed with the downstream rps3 gene and is edited on both sides of the translational stop. Editing, however, changes the amino acid sequence at positions that were well conserved before editing. Other strange editings create translational stops in open reading frames coding for functional proteins. In coxI and rps3 mRNAs CGA codons are edited to UGA stop codons only five and three codons, respectively, downstream to the initiation codon. These aberrant editings in essential open reading frames and in the rps19 pseudogene appear to have been shifted to these positions from other editing sites. These observations suggest a requirement for a continuous evolutionary constraint on the editing specificities in plant mitochondria.

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Year:  1991        PMID: 1762921      PMCID: PMC329329          DOI: 10.1093/nar/19.24.6923

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

1.  RNA editing of ATPase subunit 9 transcripts in Oenothera mitochondria.

Authors:  W Schuster; A Brennicke
Journal:  FEBS Lett       Date:  1990-07-30       Impact factor: 4.124

2.  Editing of the wheat coxIII transcript: evidence for twelve C to U and one U to C conversions and for sequence similarities around editing sites.

Authors:  J M Gualberto; J H Weil; J M Grienenberger
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

3.  Differences in editing at homologous sites in messenger RNAs from angiosperm mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nucleic Acids Res       Date:  1990-09-11       Impact factor: 16.971

4.  Distribution of RNA editing sites in Oenothera mitochondrial mRNAs and rRNAs.

Authors:  W Schuster; R Ternes; V Knoop; R Hiesel; B Wissinger; A Brennicke
Journal:  Curr Genet       Date:  1991-11       Impact factor: 3.886

5.  RNA editing in plant mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

6.  Ribosomal protein S14 transcripts are edited in Oenothera mitochondria.

Authors:  W Schuster; M Unseld; B Wissinger; A Brennicke
Journal:  Nucleic Acids Res       Date:  1990-01-25       Impact factor: 16.971

7.  Structure of the Escherichia coli S10 ribosomal protein operon.

Authors:  G Zurawski; S M Zurawski
Journal:  Nucleic Acids Res       Date:  1985-06-25       Impact factor: 16.971

8.  RNA editing in wheat mitochondria results in the conservation of protein sequences.

Authors:  J M Gualberto; L Lamattina; G Bonnard; J H Weil; J M Grienenberger
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

9.  Transcripts of the NADH-dehydrogenase subunit 3 gene are differentially edited in Oenothera mitochondria.

Authors:  W Schuster; B Wissinger; M Unseld; A Brennicke
Journal:  EMBO J       Date:  1990-01       Impact factor: 11.598

10.  The cytochrome oxidase subunit I and subunit III genes in Oenothera mitochondria are transcribed from identical promoter sequences.

Authors:  R Hiesel; W Schobel; W Schuster; A Brennicke
Journal:  EMBO J       Date:  1987-01       Impact factor: 11.598

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  35 in total

1.  Two nucleotides next to the anticodon of cytoplasmic rat tRNA(Asp) are likely generated by RNA editing.

Authors:  H Beier; M C Lee; T Sekiya; Y Kuchino; S Nishimura
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

2.  Patterns of partial RNA editing in mitochondrial genes of Beta vulgaris.

Authors:  Jeffrey P Mower; Jeffrey D Palmer
Journal:  Mol Genet Genomics       Date:  2006-07-22       Impact factor: 3.291

3.  Protein polymorphism generated by differential RNA editing of a plant mitochondrial rps12 gene.

Authors:  B Lu; R K Wilson; C G Phreaner; R M Mulligan; M R Hanson
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

4.  Introducing the plant RNA editing prediction and analysis computer tool PREPACT and an update on RNA editing site nomenclature.

Authors:  Henning Lenz; Mareike Rüdinger; Ute Volkmar; Simon Fischer; Stefan Herres; Felix Grewe; Volker Knoop
Journal:  Curr Genet       Date:  2009-12-30       Impact factor: 3.886

5.  Transfer of rps19 to the nucleus involves the gain of an RNP-binding motif which may functionally replace RPS13 in Arabidopsis mitochondria.

Authors:  H Sánchez; T Fester; S Kloska; W Schröder; W Schuster
Journal:  EMBO J       Date:  1996-05-01       Impact factor: 11.598

6.  The rapeseed mitochondrial gene encoding a homologue of the bacterial protein Ccl1 is divided into two independently transcribed reading frames.

Authors:  H Handa; G Bonnard; J M Grienenberger
Journal:  Mol Gen Genet       Date:  1996-09-13

7.  Mitochondrial Retroprocessing Promoted Functional Transfers of rpl5 to the Nucleus in Grasses.

Authors:  Zhiqiang Wu; Daniel B Sloan; Colin W Brown; Mónica Rosenblueth; Jeffrey D Palmer; Han Chuan Ong
Journal:  Mol Biol Evol       Date:  2017-09-01       Impact factor: 16.240

8.  Rps3 and rpl16 genes do not overlap in Oenothera mitochondria: GTG as a potential translation initiation codon in plant mitochondria?

Authors:  H Bock; A Brennicke; W Schuster
Journal:  Plant Mol Biol       Date:  1994-03       Impact factor: 4.076

9.  The evolutionary conservation of rps3 introns and rps19-rps3-rpl16 gene cluster in Adiantum capillus-veneris mitochondria.

Authors:  Savino Bonavita; Teresa Maria Rosaria Regina
Journal:  Curr Genet       Date:  2015-08-18       Impact factor: 3.886

10.  CURE-Chloroplast: a chloroplast C-to-U RNA editing predictor for seed plants.

Authors:  Pufeng Du; Liyan Jia; Yanda Li
Journal:  BMC Bioinformatics       Date:  2009-05-08       Impact factor: 3.169

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