Literature DB >> 8276833

A single mutation in bacteriophage T4 DNA polymerase (A737V, tsL141) decreases its processivity as a polymerase and increases its processivity as a 3'-->5' exonuclease.

P Spacciapoli1, N G Nossal.   

Abstract

The bacteriophage T4 DNA polymerase mutant A737V (tsL141 and tsCB120) was originally characterized as temperature-sensitive for DNA replication and an antimutator for transition mutations. Its antimutator phenotype is suppressed by the L771F mutation (Reha-Krantz, L. J., Stocki, S., Nonay, R., and Maughan, C. (1989) J. Cell. Biochem. 13D, 140). We find that the A737V polymerase arrests much more frequently than the wild type when polymerizing on primed single-stranded DNA templates. Although the 3'-->5' exonuclease of the mutant is indistinguishable from the wild type on single-stranded DNA, it is more active than the wild type on duplex DNA. In a single encounter with the primer, the wild type polymerase can incorporate more than 50 nucleotides. The processivity of the A737V polymerase is less than the wild type as a polymerase, but is greater than the wild type as an exonuclease. The L771F polymerase resembles the wild type in each of these properties, while the double mutant (A737V, L771F) is intermediate between the two single mutants. Kinetic studies of wild type T4 DNA polymerase (Capson, T. L., Peliska, J. A., Kaboord, B. F., Frey, M. W., Lively, C., Dahlberg, M., and Benkovic, S. J. (1992) Biochemistry 31, 10984-10994) suggest that DNA binds first to the polumerase active site, before adopting a configuration in which it can be hydrolyzed by the exonuclease. Within this framework, our studies suggest that DNA moves more readily from the polymerase- to the exonuclease-competent configuration on the A737V mutant polymerase, and that this movement is decreased by the compensating L771F mutation.

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Year:  1994        PMID: 8276833

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  17 in total

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2.  Identification of a new motif required for the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I (Klenow fragment): the RRRY motif is necessary for the binding of single-stranded DNA substrate and the template strand of the mismatched duplex.

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Journal:  J Biol Chem       Date:  2008-04-29       Impact factor: 5.157

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Journal:  Biochem J       Date:  1998-11-01       Impact factor: 3.857

Review 4.  DNA polymerase fidelity: from genetics toward a biochemical understanding.

Authors:  M F Goodman; K D Fygenson
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

Review 5.  Antimutator mutants in bacteriophage T4 and Escherichia coli.

Authors:  R M Schaaper
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

Review 6.  Regulation of DNA polymerase exonucleolytic proofreading activity: studies of bacteriophage T4 "antimutator" DNA polymerases.

Authors:  L J Reha-Krantz
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

7.  The spectrum of acridine resistant mutants of bacteriophage T4 reveals cryptic effects of the tsL141 DNA polymerase allele on spontaneous mutagenesis.

Authors:  F J Wang; L S Ripley
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

8.  John W. (Jan) Drake: A Biochemical View of a Geneticist Par Excellence.

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Journal:  Genetics       Date:  2020-12       Impact factor: 4.562

Review 9.  Bacteriophage T4 genome.

Authors:  Eric S Miller; Elizabeth Kutter; Gisela Mosig; Fumio Arisaka; Takashi Kunisawa; Wolfgang Rüger
Journal:  Microbiol Mol Biol Rev       Date:  2003-03       Impact factor: 11.056

10.  DNA nick processing by exonuclease and polymerase activities of bacteriophage T4 DNA polymerase accounts for acridine-induced mutation specificities in T4.

Authors:  V L Kaiser; L S Ripley
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

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