Literature DB >> 8265638

Fast events in protein folding initiated by nanosecond laser photolysis.

C M Jones1, E R Henry, Y Hu, C K Chan, S D Luck, A Bhuyan, H Roder, J Hofrichter, W A Eaton.   

Abstract

Initiation of protein folding by light can dramatically improve the time resolution of kinetic studies. Here we present an example of an optically triggered folding reaction by using nanosecond photodissociation of the heme-carbon monoxide complex of reduced cytochrome c. The optical trigger is based on the observation that under destabilizing conditions cytochrome c can be unfolded by preferential binding of carbon monoxide to the covalently attached heme group in the unfolded state. Photodissociation of the carbon monoxide thus triggers the folding reaction. We used time-resolved absorption spectroscopy to monitor binding at the heme. Before folding begins we observe transient binding of both nonnative and native ligands from the unfolded polypeptide on a microsecond time scale. Kinetic modeling suggests that the intramolecular binding of methionine-65 and -80 is faster than that of histidine-26 and -33, even though the histidines are closer to the heme. This optical trigger should provide a powerful method for studying chain collapse and secondary structure formation in cytochrome c without any limitations in time resolution.

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Year:  1993        PMID: 8265638      PMCID: PMC48084          DOI: 10.1073/pnas.90.24.11860

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Early steps in cytochrome c folding probed by time-resolved circular dichroism and fluorescence spectroscopy.

Authors:  G A Elöve; A F Chaffotte; H Roder; M E Goldberg
Journal:  Biochemistry       Date:  1992-08-04       Impact factor: 3.162

2.  Mitochondrial cytochrome c: preparation and activity of native and chemically modified cytochromes c.

Authors:  D L Brautigan; S Ferguson-Miller; E Margoliash
Journal:  Methods Enzymol       Date:  1978       Impact factor: 1.600

3.  Cytochrome c interaction with membranes. Absorption and emission spectra and binding characteristics of iron-free cytochrome c.

Authors:  J M Vanderkooi; M Erecińska
Journal:  Eur J Biochem       Date:  1975-12-01

4.  On the role of heme in the formation of the structure of cytochrome c.

Authors:  W R Fisher; H Taniuchi; C B Anfinsen
Journal:  J Biol Chem       Date:  1973-05-10       Impact factor: 5.157

5.  Spectroscopic studies of oxy- and carbonmonoxyhemoglobin after pulsed optical excitation.

Authors:  B I Greene; R M Hochstrasser; R B Weisman; W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1978-11       Impact factor: 11.205

6.  Manipulation of the observed kinetic phases in the refolding of denatured ferricytochromes c.

Authors:  D N Brems; E Stellwagen
Journal:  J Biol Chem       Date:  1983-03-25       Impact factor: 5.157

7.  Rate theories and puzzles of hemeprotein kinetics.

Authors:  H Frauenfelder; P G Wolynes
Journal:  Science       Date:  1985-07-26       Impact factor: 47.728

8.  Geminate recombination of O2 and hemoglobin.

Authors:  D A Chernoff; R M Hochstrasser; A W Steele
Journal:  Proc Natl Acad Sci U S A       Date:  1980-10       Impact factor: 11.205

9.  Femtosecond photolysis of CO-ligated protoheme and hemoproteins: appearance of deoxy species with a 350-fsec time constant.

Authors:  J L Martin; A Migus; C Poyart; Y Lecarpentier; R Astier; A Antonetti
Journal:  Proc Natl Acad Sci U S A       Date:  1983-01       Impact factor: 11.205

10.  Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity.

Authors:  J Hofrichter; J H Sommer; E R Henry; W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

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  83 in total

1.  Cytochrome c folds through a smooth funnel.

Authors:  M Panda; M G Benavides-Garcia; M M Pierce; B T Nall
Journal:  Protein Sci       Date:  2000-03       Impact factor: 6.725

2.  Protein folding and unfolding on a complex energy landscape.

Authors:  D T Leeson; F Gai; H M Rodriguez; L M Gregoret; R B Dyer
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

3.  From snapshot to movie: phi analysis of protein folding transition states taken one step further.

Authors:  T Ternström; U Mayor; M Akke; M Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

4.  Multiple pathways on a protein-folding energy landscape: kinetic evidence.

Authors:  R A Goldbeck; Y G Thomas; E Chen; R M Esquerra; D S Kliger
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

5.  Folding and signaling share the same pathway in a photoreceptor.

Authors:  B C Lee; A Pandit; P A Croonquist; W D Hoff
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

6.  How the folding rate constant of simple, single-domain proteins depends on the number of native contacts.

Authors:  Dmitrii E Makarov; Craig A Keller; Kevin W Plaxco; Horia Metiu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

Review 7.  Searching for "downhill scenarios" in protein folding.

Authors:  W A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

8.  Selective excitation of native fluctuations during thermal unfolding simulations: horse heart cytochrome c as a case study.

Authors:  Danilo Roccatano; Isabella Daidone; Marc-Antoine Ceruso; Cecilia Bossa; Alfredo Di Nola
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

9.  Energetics and kinetics of substrate analog-coupled staphylococcal nuclease folding revealed by a statistical mechanical approach.

Authors:  Takuya Mizukami; Shunta Furuzawa; Satoru G Itoh; Saho Segawa; Teikichi Ikura; Kunio Ihara; Hisashi Okumura; Heinrich Roder; Kosuke Maki
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-31       Impact factor: 11.205

10.  The protein-folding speed limit: intrachain diffusion times set by electron-transfer rates in denatured Ru(NH3)5(His-33)-Zn-cytochrome c.

Authors:  I-Jy Chang; Jennifer C Lee; Jay R Winkler; Harry B Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-19       Impact factor: 11.205

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