Literature DB >> 8264624

Alternative 5' splice site selection induced by heat shock.

H Takechi1, N Hosokawa, K Hirayoshi, K Nagata.   

Abstract

The mouse HSP47 gene consists of six exons separated by five introns. Three HSP47 cDNAs differing only in their 5' noncoding regions have been reported. One of these alternatively spliced mRNAs was detected only after heat shock, which caused an alternative 5' splice donor site selection. Other stress inducers, including an amino acid analog and sodium arsenite, had no effect on the alternative splicing. The alternatively spliced mRNA, which was 169 nucleotides longer in the 5' noncoding region compared to mRNA transcribed in non-heat shock conditions, was efficiently translated under heat shock conditions. This novel finding that alternative splicing is caused by artificial treatment like heat shock will provide a useful in vivo model for understanding the exon-intron recognition mechanism as well as heat shock-induced alterations in gene expression.

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Year:  1994        PMID: 8264624      PMCID: PMC358406          DOI: 10.1128/mcb.14.1.567-575.1994

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  40 in total

1.  RNA splicing is interrupted by heat shock and is rescued by heat shock protein synthesis.

Authors:  H J Yost; S Lindquist
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

2.  The distribution of two hnRNP-associated proteins defined by a monoclonal antibody is altered in heat-shocked HeLa cells.

Authors:  Y Lutz; M Jacob; J P Fuchs
Journal:  Exp Cell Res       Date:  1988-03       Impact factor: 3.905

3.  An LFA-3 cDNA encodes a phospholipid-linked membrane protein homologous to its receptor CD2.

Authors:  B Seed
Journal:  Nature       Date:  1987 Oct 29-Nov 4       Impact factor: 49.962

Review 4.  Generation of protein isoform diversity by alternative splicing: mechanistic and biological implications.

Authors:  A Andreadis; M E Gallego; B Nadal-Ginard
Journal:  Annu Rev Cell Biol       Date:  1987

5.  Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA.

Authors:  J Pelletier; N Sonenberg
Journal:  Nature       Date:  1988-07-28       Impact factor: 49.962

6.  Physiological stresses inhibit guanine-nucleotide-exchange factor in Ehrlich cells.

Authors:  A G Rowlands; K S Montine; E C Henshaw; R Panniers
Journal:  Eur J Biochem       Date:  1988-07-15

7.  Sequence and organization of genes encoding the human 27 kDa heat shock protein.

Authors:  E Hickey; S E Brandon; R Potter; G Stein; J Stein; L A Weber
Journal:  Nucleic Acids Res       Date:  1986-05-27       Impact factor: 16.971

8.  Cloning and expression of a gene encoding hsc73, the major hsp70-like protein in unstressed rat cells.

Authors:  P K Sorger; H R Pelham
Journal:  EMBO J       Date:  1987-04       Impact factor: 11.598

9.  A major collagen-binding protein of chick embryo fibroblasts is a novel heat shock protein.

Authors:  K Nagata; S Saga; K M Yamada
Journal:  J Cell Biol       Date:  1986-07       Impact factor: 10.539

10.  Selective translation of heat shock mRNA in Drosophila melanogaster depends on sequence information in the leader.

Authors:  R Klemenz; D Hultmark; W J Gehring
Journal:  EMBO J       Date:  1985-08       Impact factor: 11.598

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  15 in total

Review 1.  Stress and the cell nucleus: dynamics of gene expression and structural reorganization.

Authors:  C Jolly; R I Morimoto
Journal:  Gene Expr       Date:  1999

2.  Temperature-dependent splicing of beta-globin pre-mRNA.

Authors:  Federica Gemignani; Peter Sazani; Paul Morcos; Ryszard Kole
Journal:  Nucleic Acids Res       Date:  2002-11-01       Impact factor: 16.971

3.  Divergent mechanisms in generating molecular variations of alphaRYR and betaRYR in turkey skeletal muscle.

Authors:  Wen Chiang; Hyo-Jung Yoon; John E Linz; Judith A Airey; Gale M Strasburg
Journal:  J Muscle Res Cell Motil       Date:  2008-03-08       Impact factor: 2.698

4.  Exon skipping induced by cold stress in a potato invertase gene transcript.

Authors:  A S Bournay; P E Hedley; A Maddison; R Waugh; G C Machray
Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

5.  Cold shock induces the insertion of a cryptic exon in the neurofibromatosis type 1 (NF1) mRNA.

Authors:  E Ars; E Serra; S de la Luna; X Estivill; C Lázaro
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

Review 6.  Functional consequences of developmentally regulated alternative splicing.

Authors:  Auinash Kalsotra; Thomas A Cooper
Journal:  Nat Rev Genet       Date:  2011-09-16       Impact factor: 53.242

7.  Transcript accumulation and utilization of alternate and non-consensus splice sites in rice granule-bound starch synthase are temperature-sensitive and controlled by a single-nucleotide polymorphism.

Authors:  P D Larkin; W D Park
Journal:  Plant Mol Biol       Date:  1999-07       Impact factor: 4.076

8.  Differential expression of mRNAs for JC virus large and small tumor antigens in brain tissues from progressive multifocal leukoencephalopathy patients with and without AIDS.

Authors:  M Ishaq; G L Stoner
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-16       Impact factor: 11.205

9.  Stress-responsive maturation of Clk1/4 pre-mRNAs promotes phosphorylation of SR splicing factor.

Authors:  Kensuke Ninomiya; Naoyuki Kataoka; Masatoshi Hagiwara
Journal:  J Cell Biol       Date:  2011-09-26       Impact factor: 10.539

10.  Transcriptomic characterization of cold acclimation in larval zebrafish.

Authors:  Yong Long; Guili Song; Junjun Yan; Xiaozhen He; Qing Li; Zongbin Cui
Journal:  BMC Genomics       Date:  2013-09-11       Impact factor: 3.969

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