Literature DB >> 8263929

Crystallization of the NADP(+)-dependent glutamate dehydrogenase from Escherichia coli.

F C Korber1, P J Rizkallah, T K Attwood, J C Wootton, M J McPherson, A C North, A J Geddes, I S Abeysinghe, P J Baker, J L Dean.   

Abstract

The NADP(+)-dependent hexameric glutamate dehydrogenase from Escherichia coli has been crystallized as the apo-enzyme and also in the presence of its substrates 2-oxoglutarate, glutamate or NADP+, using either pulsed equilibrium microdialysis, or the hanging drop method of vapour diffusion. Three non-isomorphous, but related, crystal forms have been obtained, all of which belong to the orthorhombic system and are most likely to be in space group P2(1)2(1)2(1). One crystal form is grown from ammonium sulphate, includes the apoenzyme and the binary complexes with 2-oxoglutarate or NADP+, and has cell dimensions a = 157.5 A, b = 212.5 A, c = 101.0 A with a hexamer in the asymmetric unit. Crystallizations using glutamate as the precipitant produced two further crystal forms, which show significant changes in the b and c cell dimensions with respect to the apo-enzyme crystals, with parameters a = 160.0 A, b = 217.5 A c = 92.4 A and a = 160.0 A, b = 223.0 A c = 92.4 A, respectively. X-ray diffraction photographs taken with synchrotron radiation show measurable reflections to beyond 3.0 A resolution.

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Year:  1993        PMID: 8263929     DOI: 10.1006/jmbi.1993.1680

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  5 in total

1.  Crystallization and preliminary structural analyses of glutamate dehydrogenase from Peptoniphilus asaccharolyticus.

Authors:  Tania F Oliveira; John B Carrigan; Muaawia A Hamza; Michael A Sharkey; Paul C Engel; Amir R Khan
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-29

2.  A monomeric mutant of Clostridium symbiosum glutamate dehydrogenase: comparison with a structured monomeric intermediate obtained during refolding.

Authors:  S Millevoi; A Pasquo; R Chiaraluce; V Consalvi; L Giangiacomo; K L Britton; T J Stillman; D W Rice; P C Engel
Journal:  Protein Sci       Date:  1998-04       Impact factor: 6.725

3.  Modular (de)construction of complex bacterial phenotypes by CRISPR/nCas9-assisted, multiplex cytidine base-editing.

Authors:  Daniel C Volke; Román A Martino; Ekaterina Kozaeva; Andrea M Smania; Pablo I Nikel
Journal:  Nat Commun       Date:  2022-05-31       Impact factor: 17.694

4.  Structure of NADP(+)-dependent glutamate dehydrogenase from Escherichia coli--reflections on the basis of coenzyme specificity in the family of glutamate dehydrogenases.

Authors:  Michael A Sharkey; Tânia F Oliveira; Paul C Engel; Amir R Khan
Journal:  FEBS J       Date:  2013-08-20       Impact factor: 5.542

5.  A computational analysis of the three isoforms of glutamate dehydrogenase reveals structural features of the isoform EC 1.4.1.4 supporting a key role in ammonium assimilation by plants.

Authors:  Emmanuel Jaspard
Journal:  Biol Direct       Date:  2006-12-15       Impact factor: 4.540

  5 in total

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