Literature DB >> 8244927

Regions of the Bacillus subtilis ilv-leu operon involved in regulation by leucine.

J A Grandoni1, S B Fulmer, V Brizzio, S A Zahler, J M Calvo.   

Abstract

The ilv-leu operon of Bacillus subtilis is regulated in part by transcription attenuation. The cis-acting elements required for regulation by leucine lie within a 683-bp fragment of DNA from the region upstream of ilvB, the first gene of the operon. This fragment contains the ilv-leu promoter and 482 bp of the ilv-leu leader region. Spontaneous mutations that lead to increased expression of the operon were shown to lie in an imperfect inverted repeat encoding the terminator stem within the leader region. Mutations within the inverted repeat of the terminator destroyed most of the leucine-mediated repression. The remaining leucine-mediated repression probably resulted from a decrease in transcription initiation. A systematic analysis of other deletions within the ilv-leu leader region identified a 40-bp region required for the derepression that occurred during leucine limitation. This region lies within a potential RNA stem-and-loop structure that is probably required for leucine-dependent control. Deletion analysis also suggested that alternate secondary structures proximal to the terminator are involved in allowing transcription to proceed beyond the terminator. Additional experiments suggested that attenuation of the ilv-leu operon is not dependent on coupling translation to transcription of the leader region. Our data support a model proposed by Grundy and Henkin (F. J. Grundy and T. M. Henkin, Cell 74:475-482, 1993) in which uncharged tRNA acts as a positive regulatory factor to increase gene expression during amino acid limitation.

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Year:  1993        PMID: 8244927      PMCID: PMC206914          DOI: 10.1128/jb.175.23.7581-7593.1993

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  18 in total

1.  Transcriptional regulation of the ilv-leu operon of Bacillus subtilis.

Authors:  J A Grandoni; S A Zahler; J M Calvo
Journal:  J Bacteriol       Date:  1992-05       Impact factor: 3.490

2.  Transcriptional antitermination in the bgl operon of E. coli is modulated by a specific RNA binding protein.

Authors:  F Houman; M R Diaz-Torres; A Wright
Journal:  Cell       Date:  1990-09-21       Impact factor: 41.582

3.  Novel form of transcription attenuation regulates expression the Bacillus subtilis tryptophan operon.

Authors:  H Shimotsu; M I Kuroda; C Yanofsky; D J Henner
Journal:  J Bacteriol       Date:  1986-05       Impact factor: 3.490

4.  Optimal conditions for directly sequencing double-stranded PCR products with sequenase.

Authors:  J L Casanova; C Pannetier; C Jaulin; P Kourilsky
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

5.  The ilvIH operon of Escherichia coli is positively regulated.

Authors:  J V Platko; D A Willins; J M Calvo
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

6.  The RNA antiterminator causes transcription pausing in the leader region of the tryptophan operon.

Authors:  J R Roesser; C Yanofsky
Journal:  J Biol Chem       Date:  1990-04-15       Impact factor: 5.157

7.  Analysis of the Bacillus subtilis tyrS gene: conservation of a regulatory sequence in multiple tRNA synthetase genes.

Authors:  T M Henkin; B L Glass; F J Grundy
Journal:  J Bacteriol       Date:  1992-02       Impact factor: 3.490

8.  Mutations that convert the four leucine codons of the Salmonella typhimurium leu leader to four threonine codons.

Authors:  P W Carter; D L Weiss; H L Weith; J M Calvo
Journal:  J Bacteriol       Date:  1985-06       Impact factor: 3.490

9.  Nucleotide sequences that signal the initiation of transcription and translation in Bacillus subtilis.

Authors:  C P Moran; N Lang; S F LeGrice; G Lee; M Stephens; A L Sonenshein; J Pero; R Losick
Journal:  Mol Gen Genet       Date:  1982

10.  Cloning and nucleotide sequence of the leucyl-tRNA synthetase gene of Bacillus subtilis.

Authors:  P B Vander Horn; S A Zahler
Journal:  J Bacteriol       Date:  1992-06       Impact factor: 3.490

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  28 in total

1.  Characterization of the interaction of Bacillus subtilis PyrR with pyr mRNA by site-directed mutagenesis of the protein.

Authors:  Heather K Savacool; Robert L Switzer
Journal:  J Bacteriol       Date:  2002-05       Impact factor: 3.490

2.  Negative transcriptional regulation of the ilv-leu operon for biosynthesis of branched-chain amino acids through the Bacillus subtilis global regulator TnrA.

Authors:  Shigeo Tojo; Takenori Satomura; Kaori Morisaki; Ken-Ichi Yoshida; Kazutake Hirooka; Yasutaro Fujita
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

3.  The number of G residues in the Bacillus subtilis pyrG initially transcribed region governs reiterative transcription-mediated regulation.

Authors:  Alexander K W Elsholz; Casper Møller Jørgensen; Robert L Switzer
Journal:  J Bacteriol       Date:  2006-12-08       Impact factor: 3.490

4.  Genetic and biochemical analysis of the interaction of Bacillus subtilis CodY with branched-chain amino acids.

Authors:  Anuradha C Villapakkam; Luke D Handke; Boris R Belitsky; Vladimir M Levdikov; Anthony J Wilkinson; Abraham L Sonenshein
Journal:  J Bacteriol       Date:  2009-09-11       Impact factor: 3.490

5.  Evidence that the Bacillus subtilis pyrimidine regulatory protein PyrR acts by binding to pyr mRNA at three sites in vivo.

Authors:  Y Lu; R L Switzer
Journal:  J Bacteriol       Date:  1996-10       Impact factor: 3.490

Review 6.  Regulating the Intersection of Metabolism and Pathogenesis in Gram-positive Bacteria.

Authors:  Anthony R Richardson; Greg A Somerville; Abraham L Sonenshein
Journal:  Microbiol Spectr       Date:  2015-06

7.  tRNA-mediated transcription antitermination in vitro: codon-anticodon pairing independent of the ribosome.

Authors:  Frank J Grundy; Wade C Winkler; Tina M Henkin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-06       Impact factor: 11.205

8.  Attenuation control of pyrG expression in Bacillus subtilis is mediated by CTP-sensitive reiterative transcription.

Authors:  Qi Meng; Charles L Turnbough; Robert L Switzer
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-13       Impact factor: 11.205

9.  Multiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis.

Authors:  Jeanne M DiChiara; Lydia M Contreras-Martinez; Jonathan Livny; Dorie Smith; Kathleen A McDonough; Marlene Belfort
Journal:  Nucleic Acids Res       Date:  2010-02-24       Impact factor: 16.971

10.  Mutations in the gene for a tRNA that functions as a regulator of a transcriptional attenuator in Bacillus subtilis.

Authors:  D B Garrity; S A Zahler
Journal:  Genetics       Date:  1994-07       Impact factor: 4.562

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