Literature DB >> 8244003

Sequence requirements for myosin gene expression and regulation in Caenorhabditis elegans.

P G Okkema1, S W Harrison, V Plunger, A Aryana, A Fire.   

Abstract

Four Caenorhabditis elegans genes encode muscle-type specific myosin heavy chain isoforms: myo-1 and myo-2 are expressed in the pharyngeal muscles; unc-54 and myo-3 are expressed in body wall muscles. We have used transformation-rescue and lacZ fusion assays to determine sequence requirements for regulated myosin gene expression during development. Multiple tissue-specific activation elements are present for all four genes. For each of the four genes, sequences upstream of the coding region are tissue-specific promoters, as shown by their ability to drive expression of a reporter gene (lacZ) in the appropriate muscle type. Each gene contains at least one additional tissue-specific regulatory element, as defined by the ability to enhance expression of a heterologous promoter in the appropriate muscle type. In rescue experiments with unc-54, two further requirements apparently independent of tissue specificity were found: sequences within the 3' non-coding region are essential for activity while an intron near the 5' end augments expression levels. The general intron stimulation is apparently independent of intron sequence, indicating a mechanistic effect of splicing. To further characterize the myosin gene promoters and to examine the types of enhancer sequences in the genome, we have initiated a screen of C. elegans genomic DNA for fragments capable of enhancing the myo-2 promoter. The properties of enhancers recovered from this screen suggest that the promoter is limited to muscle cells in its ability to respond to enhancers.

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Year:  1993        PMID: 8244003      PMCID: PMC1205644     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  46 in total

1.  CeMyoD accumulation defines the body wall muscle cell fate during C. elegans embryogenesis.

Authors:  M Krause; A Fire; S W Harrison; J Priess; H Weintraub
Journal:  Cell       Date:  1990-11-30       Impact factor: 41.582

2.  Mapping of gene transcripts by nuclease protection assays and cDNA primer extension.

Authors:  F J Calzone; R J Britten; E H Davidson
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

Review 3.  Cis and trans mRNA splicing in C. elegans.

Authors:  T Blumenthal; J Thomas
Journal:  Trends Genet       Date:  1988-11       Impact factor: 11.639

4.  Regulatory and essential light-chain-binding sites in myosin heavy chain subfragment-1 mapped by site-directed mutagenesis.

Authors:  E J Mitchell; J Karn; D M Brown; A Newman; R Jakes; J Kendrick-Jones
Journal:  J Mol Biol       Date:  1989-07-05       Impact factor: 5.469

5.  Spatial control of gut-specific gene expression during Caenorhabditis elegans development.

Authors:  E J Aamodt; M A Chung; J D McGhee
Journal:  Science       Date:  1991-04-26       Impact factor: 47.728

6.  Isolation and characterization of a sperm-specific gene family in the nematode Caenorhabditis elegans.

Authors:  M R Klass; S Kinsley; L C Lopez
Journal:  Mol Cell Biol       Date:  1984-03       Impact factor: 4.272

7.  The Caenorhabditis elegans lin-12 gene encodes a transmembrane protein with overall similarity to Drosophila Notch.

Authors:  J Yochem; K Weston; I Greenwald
Journal:  Nature       Date:  1988-10-06       Impact factor: 49.962

8.  Expression of chimeric genes in Caenorhabditis elegans.

Authors:  R A Jefferson; M Klass; N Wolf; D Hirsh
Journal:  J Mol Biol       Date:  1987-01-05       Impact factor: 5.469

9.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

10.  Mapping muscle protein genes by in situ hybridization using biotin-labeled probes.

Authors:  D G Albertson
Journal:  EMBO J       Date:  1985-10       Impact factor: 11.598

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  199 in total

1.  Intron-mediated enhancement of gene expression independent of unique intron sequences and splicing.

Authors:  A B Rose; J A Beliakoff
Journal:  Plant Physiol       Date:  2000-02       Impact factor: 8.340

2.  Requirements for intron-mediated enhancement of gene expression in Arabidopsis.

Authors:  Alan B Rose
Journal:  RNA       Date:  2002-11       Impact factor: 4.942

3.  The Caenorhabditis elegans SMOC-1 Protein Acts Cell Nonautonomously To Promote Bone Morphogenetic Protein Signaling.

Authors:  Melisa S DeGroot; Herong Shi; Alice Eastman; Alexandra N McKillop; Jun Liu
Journal:  Genetics       Date:  2018-12-05       Impact factor: 4.562

4.  Caenorhabditis elegans levamisole resistance genes lev-1, unc-29, and unc-38 encode functional nicotinic acetylcholine receptor subunits.

Authors:  J T Fleming; M D Squire; T M Barnes; C Tornoe; K Matsuda; J Ahnn; A Fire; J E Sulston; E A Barnard; D B Sattelle; J A Lewis
Journal:  J Neurosci       Date:  1997-08-01       Impact factor: 6.167

5.  The RGM protein DRAG-1 positively regulates a BMP-like signaling pathway in Caenorhabditis elegans.

Authors:  Chenxi Tian; Debjeet Sen; Herong Shi; Marisa L Foehr; Yevgeniy Plavskin; Olena K Vatamaniuk; Jun Liu
Journal:  Development       Date:  2010-06-09       Impact factor: 6.868

6.  PKN-1, a homologue of mammalian PKN, is involved in the regulation of muscle contraction and force transmission in C. elegans.

Authors:  Hiroshi Qadota; Takayuki Miyauchi; John F Nahabedian; Jeffrey N Stirman; Hang Lu; Mutsuki Amano; Guy M Benian; Kozo Kaibuchi
Journal:  J Mol Biol       Date:  2011-01-26       Impact factor: 5.469

7.  Distinct requirements for somatic and germline expression of a generally expressed Caernorhabditis elegans gene.

Authors:  W G Kelly; S Xu; M K Montgomery; A Fire
Journal:  Genetics       Date:  1997-05       Impact factor: 4.562

8.  A first version of the Caenorhabditis elegans Promoterome.

Authors:  Denis Dupuy; Qian-Ru Li; Bart Deplancke; Mike Boxem; Tong Hao; Philippe Lamesch; Reynaldo Sequerra; Stephanie Bosak; Lynn Doucette-Stamm; Ian A Hope; David E Hill; Albertha J M Walhout; Marc Vidal
Journal:  Genome Res       Date:  2004-10       Impact factor: 9.043

9.  Starvation activates MAP kinase through the muscarinic acetylcholine pathway in Caenorhabditis elegans pharynx.

Authors:  Young-jai You; Jeongho Kim; Melanie Cobb; Leon Avery
Journal:  Cell Metab       Date:  2006-04       Impact factor: 27.287

10.  The FMRFamide-related neuropeptide FLP-20 is required in the mechanosensory neurons during memory for massed training in C. elegans.

Authors:  Chris Li; Tiffany A Timbers; Jacqueline K Rose; Tahereh Bozorgmehr; Andrea McEwan; Catharine H Rankin
Journal:  Learn Mem       Date:  2013-01-16       Impact factor: 2.460

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