Literature DB >> 8240955

Phylogeny of twenty Thermus isolates constructed from 16S rRNA gene sequence data.

D J Saul1, A G Rodrigo, R A Reeves, L C Williams, K M Borges, H W Morgan, P L Bergquist.   

Abstract

The sequences of the 16S rRNA genes of 20 Thermus isolates were determined to a high fidelity by using automated DNA sequencing and fluorescent-dye-labelled primers. The strains tested included members of the three validly named Thermus species and representatives of major taxonomic clusters defined previously for this genus. The parsimony method was used to reconstruct the phylogeny of the strains from the aligned sequences, and a bootstrap analysis revealed a number of well-supported clades. Our results are not consistent with groupings inferred from numerical taxonomy data but support the conjecture that the genus Thermus contains more species than the three currently recognized species.

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Year:  1993        PMID: 8240955     DOI: 10.1099/00207713-43-4-754

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  11 in total

1.  Purification and characterization of the recombinant Thermus sp. strain T2 alpha-galactosidase expressed in Escherichia coli.

Authors:  M Ishiguro; S Kaneko; A Kuno; Y Koyama; S Yoshida; G G Park; Y Sakakibara; I Kusakabe; H Kobayashi
Journal:  Appl Environ Microbiol       Date:  2001-04       Impact factor: 4.792

Review 2.  Search and discovery strategies for biotechnology: the paradigm shift.

Authors:  A T Bull; A C Ward; M Goodfellow
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

3.  Formation of multilayered photosynthetic biofilms in an alkaline thermal spring in Yellowstone National Park, Wyoming.

Authors:  Sarah M Boomer; Katherine L Noll; Gill G Geesey; Bryan E Dutton
Journal:  Appl Environ Microbiol       Date:  2009-02-13       Impact factor: 4.792

4.  Cloning, sequencing and overexpression in Escherichia coli of a xylanase gene, xynA from the thermophilic bacterium Rt8B.4 genus Caldicellulosiruptor.

Authors:  P P Dwivedi; M D Gibbs; D J Saul; P L Bergquist
Journal:  Appl Microbiol Biotechnol       Date:  1996-03       Impact factor: 4.813

5.  Cloning and sequencing of a serine proteinase gene from a thermophilic Bacillus species and its expression in Escherichia coli.

Authors:  B Maciver; R H McHale; D J Saul; P L Bergquist
Journal:  Appl Environ Microbiol       Date:  1994-11       Impact factor: 4.792

6.  Dissimilatory reduction of Fe(III) and other electron acceptors by a Thermus isolate.

Authors:  T L Kieft; J K Fredrickson; T C Onstott; Y A Gorby; H M Kostandarithes; T J Bailey; D W Kennedy; S W Li; A E Plymale; C M Spadoni; M S Gray
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

7.  Molecular diversity and catalytic activity of Thermus DNA polymerases.

Authors:  Moreland D Gibbs; Rosalind A Reeves; David Mandelman; Qingli Mi; Jun Lee; Peter L Bergquist
Journal:  Extremophiles       Date:  2009-07-12       Impact factor: 2.395

8.  Polar lipids and fatty acid composition of Thermus strains from New Zealand.

Authors:  A S Ferraz; L Carreto; S Tenreiro; M F Nobre; M S da Costa
Journal:  Antonie Van Leeuwenhoek       Date:  1994       Impact factor: 2.271

9.  Cloning, sequencing, and expression of a xylanase gene from the extreme thermophile Dictyoglomus thermophilum Rt46B.1 and activity of the enzyme on fiber-bound substrate.

Authors:  M D Gibbs; R A Reeves; P L Bergquist
Journal:  Appl Environ Microbiol       Date:  1995-12       Impact factor: 4.792

10.  Biofilm bacterial community structure in streams affected by acid mine drainage.

Authors:  Gavin Lear; Dev Niyogi; Jon Harding; Yimin Dong; Gillian Lewis
Journal:  Appl Environ Microbiol       Date:  2009-04-10       Impact factor: 4.792

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