Literature DB >> 8217304

Comprehensive restriction enzyme lists to update any DNA sequence computer program.

E Raschke1.   

Abstract

Restriction enzyme lists are presented for the practical working geneticist to update any DNA computer program. These lists combine formerly scattered information and contain all presently known restriction enzymes with a unique recognition sequence, a cut site, or methylation (in)sensitivity. The lists are in the shortest possible form to also be functional with small DNA computer programs, and will produce clear restriction maps without any redundancy or loss of information. The lists discern between commercial and noncommercial enzymes, and prototype enzymes and different isoschizomers are cross-referenced. Differences in general methylation sensitivities and (in)sensitivities against Dam and Dcm methylases of Escherichia coli are indicated. Commercial methylases and intron-encoded endonucleases are included. An address list is presented to contact commercial suppliers. The lists are constantly updated and available in electronic form as pure US ASCII files, and in formats for the DNA computer programs DNA-Strider for Apple Macintosh, and DNAsis for IBM personal computers or compatibles via e-mail from the internet address: NETSERV@EMBL-HEIDELBERG.DE by sending only the message HELP RELIBRARY.

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Year:  1993        PMID: 8217304     DOI: 10.1016/1050-3862(93)90045-k

Source DB:  PubMed          Journal:  Genet Anal Tech Appl        ISSN: 1050-3862


  4 in total

1.  The EMBL Nucleotide Sequence Database.

Authors:  G Stoesser; P Sterk; M A Tuli; P J Stoehr; G N Cameron
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

2.  The European Bioinformatics Institute (EBI) databases.

Authors:  P Rodriguez-Tomé; P J Stoehr; G N Cameron; T P Flores
Journal:  Nucleic Acids Res       Date:  1996-01-01       Impact factor: 16.971

3.  The European Bioinformatics Institute (EBI) databases.

Authors:  D B Emmert; P J Stoehr; G Stoesser; G N Cameron
Journal:  Nucleic Acids Res       Date:  1994-09       Impact factor: 16.971

4.  Cloning and sequencing of LlaDCHI [corrected] restriction/modification genes from Lactococcus lactis and relatedness of this system to the Streptococcus pneumoniae DpnII system.

Authors:  S Moineau; S A Walker; E R Vedamuthu; P A Vandenbergh
Journal:  Appl Environ Microbiol       Date:  1995-06       Impact factor: 4.792

  4 in total

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