Literature DB >> 8211138

Control of the exo and endo pathways of the Diels-Alder reaction by antibody catalysis.

V E Gouverneur1, K N Houk, B de Pascual-Teresa, B Beno, K D Janda, R A Lerner.   

Abstract

Catalytic antibodies that control the reaction pathways of the Diels-Alder cycloaddition have been generated. One antibody catalyzes the favored endo and the other the disfavored exo pathway to yield the respective cis and trans adducts in enantiomerically pure form. A comparison of the x-ray structure of the hapten with the calculated geometry of the transition structure showed that [2.2.2] bicyclic compounds are excellent mimics of the transition state of the Diels-Alder reaction. To achieve catalysis and the high degree of stereoselectivity shown here, the antibody must simultaneously control the conformation of the individual reactants and their relation to each other. In the case of the disfavored process, binding energy must be used to reroute the reaction along a higher energy pathway. The rerouting of reaction pathways has become a major focus of antibody catalysis and other disfavored reactions can be expected to be catalyzed so long as the energy barrier is not extreme. The energy requirements needed for absolute control of all of the stereoisomers of many Diels-Alder reactions fall in the energy range (approximately 20 kilocalories per mole) deliverable by antibody binding.

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Year:  1993        PMID: 8211138     DOI: 10.1126/science.8211138

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  20 in total

1.  Steroid binding by antibodies and artificial receptors: exploration of theoretical methods to determine the origins of binding affinities and specificities.

Authors:  S Handschuh; B Goldfuss; J Chen; J Gasteiger; K N Houk
Journal:  J Comput Aided Mol Des       Date:  2000-10       Impact factor: 3.686

2.  A structural basis for the activity of retro-Diels-Alder catalytic antibodies: evidence for a catalytic aromatic residue.

Authors:  Marina Hugot; Nicolas Bensel; Monique Vogel; Martine T Reymond; Beda Stadler; Jean-Louis Reymond; Ulrich Baumann
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

3.  Evaluation and ranking of enzyme designs.

Authors:  Gert Kiss; Daniela Röthlisberger; David Baker; K N Houk
Journal:  Protein Sci       Date:  2010-09       Impact factor: 6.725

4.  Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction.

Authors:  Justin B Siegel; Alexandre Zanghellini; Helena M Lovick; Gert Kiss; Abigail R Lambert; Jennifer L St Clair; Jasmine L Gallaher; Donald Hilvert; Michael H Gelb; Barry L Stoddard; Kendall N Houk; Forrest E Michael; David Baker
Journal:  Science       Date:  2010-07-16       Impact factor: 47.728

5.  Computational design of a Diels-Alderase from a thermophilic esterase: the importance of dynamics.

Authors:  Mats Linder; Adam Johannes Johansson; Tjelvar S G Olsson; John Liebeschuetz; Tore Brinck
Journal:  J Comput Aided Mol Des       Date:  2012-09-16       Impact factor: 3.686

6.  Impact of scaffold rigidity on the design and evolution of an artificial Diels-Alderase.

Authors:  Nathalie Preiswerk; Tobias Beck; Jessica D Schulz; Peter Milovník; Clemens Mayer; Justin B Siegel; David Baker; Donald Hilvert
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-20       Impact factor: 11.205

Review 7.  The expanding world of biosynthetic pericyclases: cooperation of experiment and theory for discovery.

Authors:  Cooper S Jamieson; Masao Ohashi; Fang Liu; Yi Tang; K N Houk
Journal:  Nat Prod Rep       Date:  2019-05-22       Impact factor: 13.423

Review 8.  Hapten design for the generation of catalytic antibodies.

Authors:  N R Thomas
Journal:  Appl Biochem Biotechnol       Date:  1994 May-Jun       Impact factor: 2.926

Review 9.  Computational strategies for the design of new enzymatic functions.

Authors:  K Świderek; I Tuñón; V Moliner; J Bertran
Journal:  Arch Biochem Biophys       Date:  2015-03-19       Impact factor: 4.013

10.  Induced-fit catalysis of corannulene bowl-to-bowl inversion.

Authors:  Michal Juríček; Nathan L Strutt; Jonathan C Barnes; Anna M Butterfield; Edward J Dale; Kim K Baldridge; J Fraser Stoddart; Jay S Siegel
Journal:  Nat Chem       Date:  2014-01-26       Impact factor: 24.427

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