Literature DB >> 8207954

On the origin of the periodicity of three in protein coding DNA sequences.

G Gutiérrez, J L Oliver, A Marín.   

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Year:  1994        PMID： 8207954     DOI： 10.1006/jtbi.1994.1080

Source DB:  PubMed          Journal:  J Theor Biol        ISSN： 0022-5193            Impact factor:   2.691


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  16 in total

1.  Measuring the coding potential of genomic sequences through a combination of triplet occurrence patterns and RNY preference.

Authors:  Christoforos Nikolaou; Yannis Almirantis
Journal:  J Mol Evol       Date:  2004-09       Impact factor: 2.395

2.  Localizing triplet periodicity in DNA and cDNA sequences.

Authors:  Liya Wang; Lincoln D Stein
Journal:  BMC Bioinformatics       Date:  2010-11-08       Impact factor: 3.169

3.  The 3-base periodicity and codon usage of coding sequences are correlated with gene expression at the level of transcription elongation.

Authors:  Edoardo Trotta
Journal:  PLoS One       Date:  2011-06-28       Impact factor: 3.240

4.  Profile-statistical periodicity of DNA coding regions.

Authors:  Maria Chaley; Vladimir Kutyrkin
Journal:  DNA Res       Date:  2011-07-25       Impact factor: 4.458

5.  3-base periodicity in coding DNA is affected by intercodon dinucleotides.

Authors:  Joaquín Sánchez
Journal:  Bioinformation       Date:  2011-07-19

6.  Genomes are covered with ubiquitous 11 bp periodic patterns, the "class A flexible patterns".

Authors:  Etienne Larsabal; Antoine Danchin
Journal:  BMC Bioinformatics       Date:  2005-08-24       Impact factor: 3.169

7.  Categorical spectral analysis of periodicity in human and viral genomes.

Authors:  Elizabeth D Howe; Jun S Song
Journal:  Nucleic Acids Res       Date:  2012-12-14       Impact factor: 16.971

8.  [Chromosomal localization and molecular organization of human genomic fragment containing TNF/LT locus in transgenic mice].

Authors:  A R Galimov; A A Kruglov; N L Bol'sheva; O Iu Iurkevich; D Ia Lipin'sh; I A Mufazalov; D V Kuprash; S A Nedospasov
Journal:  Mol Biol (Mosk)       Date:  2008 Jul-Aug

9.  A novel DNA sequence periodicity decodes nucleosome positioning.

Authors:  Kaifu Chen; Qingshu Meng; Lina Ma; Qingyou Liu; Petrus Tang; Chungshung Chiu; Songnian Hu; Jun Yu
Journal:  Nucleic Acids Res       Date:  2008-10-01       Impact factor: 16.971

10.  Using triplet periodicity of nucleotide sequences for finding potential reading frame shifts in genes.

Authors:  F E Frenkel; E V Korotkov
Journal:  DNA Res       Date:  2009-03-03       Impact factor: 4.458
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