Literature DB >> 8200537

CCC.UGA: a new site of ribosomal frameshifting in Escherichia coli.

M H de Smit1, J van Duin, P H van Knippenberg, H G van Eijk.   

Abstract

To activate expression of a human transferrin (Tf)-encoding cDNA in Escherichia coli by translational coupling, it was placed in an expression plasmid downstream from a 5'-terminal fragment from the replicase (R)-encoding gene of bacteriophage MS2. The resulting construct was found to produce, besides the desired Tf, a protein with the mobility of a fusion product (RTf) of the N-terminal R fragment and Tf. Analysis of available mutants showed that this fusion results from +1 ribosomal frameshifting at the end of the R reading frame. This region contains the sequence, CCC.UGA, suggesting that before termination occurs, tRNA(Pro) may dislodge from the CCC codon and reassociate with the +1 triplet CCU. By further site-directed mutagenesis, we demonstrate that both the CCC codon and the termination codon are indeed required for the observed 2-4% frameshifting. When either triplet is changed, the frequency of frameshifting drops to 0.3% or less. These results classify CCC.UGA as a new '+1 shifty stop'.

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Year:  1994        PMID: 8200537     DOI: 10.1016/0378-1119(94)90602-5

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  10 in total

1.  Nonsense-mediated decay mutants do not affect programmed -1 frameshifting.

Authors:  L Bidou; G Stahl; I Hatin; O Namy; J P Rousset; P J Farabaugh
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

2.  Imbalance of tRNA(Pro) isoacceptors induces +1 frameshifting at near-cognate codons.

Authors:  Michael O'Connor
Journal:  Nucleic Acids Res       Date:  2002-02-01       Impact factor: 16.971

3.  Sequences that direct significant levels of frameshifting are frequent in coding regions of Escherichia coli.

Authors:  Olga L Gurvich; Pavel V Baranov; Jiadong Zhou; Andrew W Hammer; Raymond F Gesteland; John F Atkins
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

4.  Genome sequence and global gene expression of Q54, a new phage species linking the 936 and c2 phage species of Lactococcus lactis.

Authors:  Louis-Charles Fortier; Ali Bransi; Sylvain Moineau
Journal:  J Bacteriol       Date:  2006-09       Impact factor: 3.490

5.  rRNA mutations that inhibit transfer-messenger RNA activity on stalled ribosomes.

Authors:  Jacob Crandall; Milagros Rodriguez-Lopez; Michael Pfeiffer; Bailey Mortensen; Allen Buskirk
Journal:  J Bacteriol       Date:  2009-11-06       Impact factor: 3.490

6.  Quantitative analysis of in vivo ribosomal events at UGA and UAG stop codons.

Authors:  S Mottagui-Tabar
Journal:  Nucleic Acids Res       Date:  1998-06-01       Impact factor: 16.971

Review 7.  Regulators of Viral Frameshifting: More Than RNA Influences Translation Events.

Authors:  Wesley D Penn; Haley R Harrington; Jonathan P Schlebach; Suchetana Mukhopadhyay
Journal:  Annu Rev Virol       Date:  2020-06-29       Impact factor: 10.431

8.  Expression of recombinant protein encoded by LOC387715 in Escherichia coli.

Authors:  Dequan Chen; Marlyn P Langford; Chris Duggan; Benjamin J Madden; Albert O Edwards
Journal:  Protein Expr Purif       Date:  2007-04-03       Impact factor: 1.650

9.  Reading two bases twice: mammalian antizyme frameshifting in yeast.

Authors:  S Matsufuji; T Matsufuji; N M Wills; R F Gesteland; J F Atkins
Journal:  EMBO J       Date:  1996-03-15       Impact factor: 11.598

10.  Two groups of phenylalanine biosynthetic operon leader peptides genes: a high level of apparently incidental frameshifting in decoding Escherichia coli pheL.

Authors:  Olga L Gurvich; S Joakim Näsvall; Pavel V Baranov; Glenn R Björk; John F Atkins
Journal:  Nucleic Acids Res       Date:  2010-12-21       Impact factor: 16.971

  10 in total

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