Literature DB >> 8199047

Regulatory and coding regions of the segmentation gene hunchback are functionally conserved between Drosophila virilis and Drosophila melanogaster.

W Lukowitz1, C Schröder, G Glaser, M Hülskamp, D Tautz.   

Abstract

The segmentation gene hunchback (hb) is involved in setting up the anterior-posterior axis of the Drosophila embryo. It is expressed maternally and zygotically and it plays a key role in integrating the effects of the anterior and posterior maternal systems. The hb gene from D. virilis has previously been cloned and was shown to be well conserved in its coding region, but less so in its upstream region which shows a more patchy pattern of conserved and diverged sequences. This work deals with the functional conservation of hb between the two species. We have mapped two additional regulatory elements for the expression of hb in the early embryo, namely the enhancer for the maternal expression and the enhancer region for the late blastoderm expression. Fragments containing these two elements, the previously identified bicoid dependent element for the early blastoderm expression of hb and the coding region were taken from D. virilis and tested in the D. melanogaster background. We find that all enhancer elements as well as the coding region are functionally conserved between the two species. Comparison of the upstream sequences that include the enhancer region for the late blastoderm expression reveal seven highly conserved blocks. Some of these contain consensus binding sites for transregulatory factors that are likely to control the respective expression domains.

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Year:  1994        PMID: 8199047     DOI: 10.1016/0925-4773(94)90024-8

Source DB:  PubMed          Journal:  Mech Dev        ISSN: 0925-4773            Impact factor:   1.882


  14 in total

1.  Target selectivity of bicoid is dependent on nonconsensus site recognition and protein-protein interaction.

Authors:  C Zhao; V Dave; F Yang; T Scarborough; J Ma
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

2.  lir-2, lir-1 and lin-26 encode a new class of zinc-finger proteins and are organized in two overlapping operons both in Caenorhabditis elegans and in Caenorhabditis briggsae.

Authors:  P Dufourcq; P Chanal; S Vicaire; E Camut; S Quintin; B G den Boer; J M Bosher; M Labouesse
Journal:  Genetics       Date:  1999-05       Impact factor: 4.562

3.  Quantitative analysis of binding motifs mediating diverse spatial readouts of the Dorsal gradient in the Drosophila embryo.

Authors:  Dmitri Papatsenko; Michael Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-28       Impact factor: 11.205

4.  Sequence-based model of gap gene regulatory network.

Authors:  Konstantin Kozlov; Vitaly Gursky; Ivan Kulakovskiy; Maria Samsonova
Journal:  BMC Genomics       Date:  2014-12-19       Impact factor: 3.969

5.  The role of Bicoid cooperative binding in the patterning of sharp borders in Drosophila melanogaster.

Authors:  Francisco J P Lopes; Alexander V Spirov; Paulo M Bisch
Journal:  Dev Biol       Date:  2012-07-25       Impact factor: 3.582

6.  Statistical tests for natural selection on regulatory regions based on the strength of transcription factor binding sites.

Authors:  Alan M Moses
Journal:  BMC Evol Biol       Date:  2009-12-09       Impact factor: 3.260

7.  Dynamic evolution of precise regulatory encodings creates the clustered site signature of enhancers.

Authors:  Justin Crocker; Nathan Potter; Albert Erives
Journal:  Nat Commun       Date:  2010-10-19       Impact factor: 14.919

8.  Nomadic enhancers: tissue-specific cis-regulatory elements of yellow have divergent genomic positions among Drosophila species.

Authors:  Gizem Kalay; Patricia J Wittkopp
Journal:  PLoS Genet       Date:  2010-11-24       Impact factor: 5.917

9.  Precise registration of gene expression boundaries by a repressive morphogen in Drosophila.

Authors:  Danyang Yu; Stephen Small
Journal:  Curr Biol       Date:  2008-06-24       Impact factor: 10.834

10.  Gene circuit analysis of the terminal gap gene huckebein.

Authors:  Maksat Ashyraliyev; Ken Siggens; Hilde Janssens; Joke Blom; Michael Akam; Johannes Jaeger
Journal:  PLoS Comput Biol       Date:  2009-10-30       Impact factor: 4.475

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