Literature DB >> 8188217

Identification of RAPD primers that reveal extensive polymorphisms between laboratory strains of zebrafish.

S L Johnson1, C N Midson, E W Ballinger, J H Postlethwait.   

Abstract

The zebrafish has recently emerged as a useful system for understanding vertebrate developmental genetics, despite the lack of a linkage map. To identify DNA-based genetic polymorphisms for constructing a genetic map, we have screened a collection of RAPD primers for their utility in identifying genetic polymorphisms between two laboratory strains of zebrafish. Here, we report 116 primers that identify 721 strain-specific genetic markers and show how they can be used in haploid genetics of zebrafish.

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Year:  1994        PMID: 8188217     DOI: 10.1006/geno.1994.1026

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  17 in total

1.  Centromere-linkage analysis and consolidation of the zebrafish genetic map.

Authors:  S L Johnson; M A Gates; M Johnson; W S Talbot; S Horne; K Baik; S Rude; J R Wong; J H Postlethwait
Journal:  Genetics       Date:  1996-04       Impact factor: 4.562

2.  Identification of selected gamma-ray induced deficiencies in zebrafish using multiplex polymerase chain reaction.

Authors:  A Fritz; M Rozowski; C Walker; M Westerfield
Journal:  Genetics       Date:  1996-12       Impact factor: 4.562

3.  Identifying candidate genes for 2p15p16.1 microdeletion syndrome using clinical, genomic, and functional analysis.

Authors:  Hani Bagheri; Chansonette Badduke; Ying Qiao; Rita Colnaghi; Iga Abramowicz; Diana Alcantara; Christopher Dunham; Jiadi Wen; Robert S Wildin; Malgorzata Jm Nowaczyk; Jennifer Eichmeyer; Anna Lehman; Bruno Maranda; Sally Martell; Xianghong Shan; Suzanne Me Lewis; Mark O'Driscoll; Cheryl Y Gregory-Evans; Evica Rajcan-Separovic
Journal:  JCI Insight       Date:  2016-03-17

4.  Assignment of sockeye salmon (Oncorhynchus nerka) to spawning sites using DNA markers.

Authors:  Graham E Corley-Smith; Liv Wennerberg; Joy A Schembri; Chinten J Lim; Karen L Cooper; Bruce P Brandhorst
Journal:  Mar Biotechnol (NY)       Date:  2005 Sep-Oct       Impact factor: 3.619

5.  Genetic linkage maps of the guppy ( Poecilia reticulata): assignment of RAPD markers to multipoint linkage groups.

Authors:  Gideon Khoo; Meng Huat Lim; Haridas Suresh; Damien K Y Gan; Kok Fang Lim; Fan Chen; Woon-Khiong Chan; Tit Meng Lim; Violet P E Phang
Journal:  Mar Biotechnol (NY)       Date:  2003 May-Jun       Impact factor: 3.619

6.  Effects of Habitat Complexity on Pair-Housed Zebrafish.

Authors:  Victoria A Keck; Dale S Edgerton; Susan Hajizadeh; Larry L Swift; William D Dupont; Christian Lawrence; Kelli L Boyd
Journal:  J Am Assoc Lab Anim Sci       Date:  2015-07       Impact factor: 1.232

7.  DANA elements: a family of composite, tRNA-derived short interspersed DNA elements associated with mutational activities in zebrafish (Danio rerio).

Authors:  Z Izsvák; Z Ivics; D Garcia-Estefania; S C Fahrenkrug; P B Hackett
Journal:  Proc Natl Acad Sci U S A       Date:  1996-02-06       Impact factor: 11.205

8.  Collagen IX is required for the integrity of collagen II fibrils and the regulation of vascular plexus formation in zebrafish caudal fins.

Authors:  Cheng-chen Huang; Tai-Chuan Wang; Bo-Hung Lin; Yi-Wen Wang; Stephen L Johnson; John Yu
Journal:  Dev Biol       Date:  2009-06-06       Impact factor: 3.582

9.  montalcino, A zebrafish model for variegate porphyria.

Authors:  Kimberly A Dooley; Paula G Fraenkel; Nathaniel B Langer; Bettina Schmid; Alan J Davidson; Gerhard Weber; Ken Chiang; Helen Foott; Caitlin Dwyer; Rebecca A Wingert; Yi Zhou; Barry H Paw; Leonard I Zon
Journal:  Exp Hematol       Date:  2008-06-11       Impact factor: 3.084

Review 10.  Learning to Fish with Genetics: A Primer on the Vertebrate Model Danio rerio.

Authors:  Nathalia G Holtzman; M Kathryn Iovine; Jennifer O Liang; Jacqueline Morris
Journal:  Genetics       Date:  2016-07       Impact factor: 4.562

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