Literature DB >> 8184553

Association of a host DNA structure with retroviral integration sites in chromosomal DNA.

E Milot1, A Belmaaza, E Rassart, P Chartrand.   

Abstract

Integration of retroviral genomes is a site-specific process with respect to the virus but not the host genome. Numerous chromosomal sites and various sequences can be used as targets. Nevertheless, preferential regions and integration patterns have been observed. Using a functional assay, we investigated if host structural DNA elements could be associated with retroviral integration sites. The results were that 9 of 10 distinct retroviral integration events occurred in close proximity of structural elements behaving like intrinsically bent DNA.

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Substances：

Year:  1994        PMID： 8184553     DOI： 10.1006/viro.1994.1310

Source DB:  PubMed          Journal:  Virology        ISSN： 0042-6822            Impact factor:   3.616


  10 in total

1.  Isolation and analysis of retroviral integration targets by solo long terminal repeat inverse PCR.

Authors:  Yi Feng Jin; Toshio Ishibashi; Akio Nomoto; Michiaki Masuda
Journal:  J Virol       Date:  2002-06       Impact factor: 5.103

2.  Factors affecting transposition of the Himar1 mariner transposon in vitro.

Authors:  D J Lampe; T E Grant; H M Robertson
Journal:  Genetics       Date:  1998-05       Impact factor: 4.562

3.  Design of artificial sequence-specific DNA bending ligands.

Authors:  D A Liberles; P B Dervan
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

4.  Chromosome structure and human immunodeficiency virus type 1 cDNA integration: centromeric alphoid repeats are a disfavored target.

Authors:  S Carteau; C Hoffmann; F Bushman
Journal:  J Virol       Date:  1998-05       Impact factor: 5.103

5.  Sequence analysis of the human DNA flanking sites of human immunodeficiency virus type 1 integration.

Authors:  S W Stevens; J D Griffith
Journal:  J Virol       Date:  1996-09       Impact factor: 5.103

6.  Full-length proviruses of baboon endogenous virus (BaEV) and dispersed BaEV reverse transcriptase retroelements in the genome of baboon species.

Authors:  A C van der Kuyl; J T Dekker; J Goudsmit
Journal:  J Virol       Date:  1995-09       Impact factor: 5.103

7.  The unusual structures of the hot-regions flanking large-scale deletions in human mitochondrial DNA.

Authors:  J H Hou; Y H Wei
Journal:  Biochem J       Date:  1996-09-15       Impact factor: 3.857

Review 8.  Sites of retroviral DNA integration: From basic research to clinical applications.

Authors:  Erik Serrao; Alan N Engelman
Journal:  Crit Rev Biochem Mol Biol       Date:  2015-10-28       Impact factor: 8.250

9.  DNA bending creates favored sites for retroviral integration: an explanation for preferred insertion sites in nucleosomes.

Authors:  H P Müller; H E Varmus
Journal:  EMBO J       Date:  1994-10-03       Impact factor: 11.598

10.  Integration and Fixation Preferences of Human and Mouse Endogenous Retroviruses Uncovered with Functional Data Analysis.

Authors:  Rebeca Campos-Sánchez; Marzia A Cremona; Alessia Pini; Francesca Chiaromonte; Kateryna D Makova
Journal:  PLoS Comput Biol       Date:  2016-06-16       Impact factor: 4.475
  10 in total

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