Literature DB >> 8183879

Cyclic peptides as proteases: a reevaluation.

D R Corey1, M A Phillips.   

Abstract

A recent report [Atassi, M. Z. and Manshouri, T. (1993) Proc. Natl. Acad. Sci. USA 90, 8282-8286] described the design and synthesis of two 29-amino acid cyclic peptides that were reported to hydrolyze both ester and amide bonds with chymotrypsin-like or trypsin-like specificity. We have synthesized the trypsin-mimic peptide (TrPepz) and detect no activity toward either ester or peptide substrates. The same result was independently obtained by Wells et al. [Wells, J. A., Fairbrother, W. J., Otlewski, J., Laskowski, M., Jr., & Burnier, J. (1994) Proc. Natl. Acad. Sci. USA 91, 4110-4114.] Additionally, we found that Atassi and Manshouri failed to obtain accurate kinetic constants for trypsin- and chymotrypsin-catalyzed ester hydrolysis because the high concentrations of trypsin and chymotrypsin that they report using would have prevented evaluation of initial rates. These findings are incompatible with the claims, reported by Atassi and Manshouri, that TrPepz has trypsin-like activity.

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Year:  1994        PMID: 8183879      PMCID: PMC43733          DOI: 10.1073/pnas.91.10.4106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  Determination of the individual rate constants of alpha-chymotrypsin-catalyzed hydrolysis with the added nucleophilic agent, 1,4-butanediol.

Authors:  I V. Berezin; N F. Kazanskaya; A A. Klyosov
Journal:  FEBS Lett       Date:  1971-06-10       Impact factor: 4.124

2.  A modified spectrophotometric determination of chymotrypsin, trypsin, and thrombin.

Authors:  B C HUMMEL
Journal:  Can J Biochem Physiol       Date:  1959-12

3.  Structure and specific binding of trypsin: comparison of inhibited derivatives and a model for substrate binding.

Authors:  M Krieger; L M Kay; R M Stroud
Journal:  J Mol Biol       Date:  1974-02-25       Impact factor: 5.469

4.  Determination of the operational molarity of solutions of bovine alpha-chymotrypsin, trypsin, thrombin and factor Xa by spectrofluorimetric titration.

Authors:  G W Jameson; D V Roberts; R W Adams; W S Kyle; D T Elmore
Journal:  Biochem J       Date:  1973-01       Impact factor: 3.857

5.  A reinvestigation of a synthetic peptide (TrPepz) designed to mimic trypsin.

Authors:  J A Wells; W J Fairbrother; J Otlewski; M Laskowski; J Burnier
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

6.  Design of peptide enzymes (pepzymes): surface-simulation synthetic peptides that mimic the chymotrypsin and trypsin active sites exhibit the activity and specificity of the respective enzyme.

Authors:  M Z Atassi; T Manshouri
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

7.  Identification of novel peptide antagonists for GPIIb/IIIa from a conformationally constrained phage peptide library.

Authors:  K T O'Neil; R H Hoess; S A Jackson; N S Ramachandran; S A Mousa; W F DeGrado
Journal:  Proteins       Date:  1992-12
  7 in total
  8 in total

1.  Synthesis of functionalised nucleosides for incorporation into nucleic acid-based serine protease mimics.

Authors:  Mieke A Catry; Annemieke Madder
Journal:  Molecules       Date:  2007-01-31       Impact factor: 4.411

Review 2.  On the failure of de novo-designed peptides as biocatalysts.

Authors:  M J Corey; E Corey
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

Review 3.  Can small cyclic peptides have the activity and specificity of proteolytic enzymes?

Authors:  B W Matthews; C S Craik; H Neurath
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

4.  Structure of a cyclic peptide with a catalytic triad, determined by computer simulation and NMR spectroscopy.

Authors:  B Walse; M Ullner; C Lindbladh; L Bülow; T Drakenberg; O Teleman
Journal:  J Comput Aided Mol Des       Date:  1996-02       Impact factor: 3.686

5.  Synthesis and conformational analysis by 1H NMR and restrained molecular dynamics simulations of the cyclic decapeptide [Ser-Tyr-Ser-Met-Glu-His-Phe-Arg-Trp-Gly].

Authors:  R A Buono; N Kucharczyk; M Neuenschwander; J Kemmink; L Y Hwang; J L Fauchère; C A Venanzi
Journal:  J Comput Aided Mol Des       Date:  1996-06       Impact factor: 3.686

6.  A reinvestigation of a synthetic peptide (TrPepz) designed to mimic trypsin.

Authors:  J A Wells; W J Fairbrother; J Otlewski; M Laskowski; J Burnier
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

7.  Helicase-like functions in phosphate loop containing beta-alpha polypeptides.

Authors:  Pratik Vyas; Olena Trofimyuk; Liam M Longo; Fanindra Kumar Deshmukh; Michal Sharon; Dan S Tawfik
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-20       Impact factor: 11.205

8.  Molecular glues for manipulating enzymes: trypsin inhibition by benzamidine-conjugated molecular glues.

Authors:  Rina Mogaki; Kou Okuro; Takuzo Aida
Journal:  Chem Sci       Date:  2015-03-18       Impact factor: 9.825

  8 in total

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