Literature DB >> 8177740

Rational design and PCR-based synthesis of an artificial Schizophyllum commune xylanase gene.

R W Graham1, T Atkinson, D G Kilburn, R C Miller, R A Warren.   

Abstract

A synthetic gene encoding the Schizophyllum commune xylanase XynA was constructed by a novel PCR-based procedure. Three long oligonucleotides were synthesized and used in combination with flanking PCR primers to generate a 607 base pair gene which contained 31 unique locations for restriction enzyme cleavage. The amino acid sequence was tailored for expression in Escherichia coli by using only those codons found in highly expressed E. coli genes. The availability of the gene will facilitate analysis of the structure and function of this and other beta-(1,4) xylanases.

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Year:  1993        PMID: 8177740      PMCID: PMC311407          DOI: 10.1093/nar/21.21.4923

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

Review 1.  Rhodopsin, photoreceptor of the rod cell. An emerging pattern for structure and function.

Authors:  H G Khorana
Journal:  J Biol Chem       Date:  1992-01-05       Impact factor: 5.157

2.  Ethanol precipitation of DNA with linear polyacrylamide as carrier.

Authors:  C Gaillard; F Strauss
Journal:  Nucleic Acids Res       Date:  1990-01-25       Impact factor: 16.971

3.  Double-stranded sequencing, using mini-prep plasmids, in eleven hours.

Authors:  K B Gaterman; G H Rosenberg; N F Käufer
Journal:  Biotechniques       Date:  1988 Nov-Dec       Impact factor: 1.993

4.  Essential carboxy groups in xylanase A.

Authors:  M R Bray; A J Clarke
Journal:  Biochem J       Date:  1990-08-15       Impact factor: 3.857

5.  An alternate method for synthesis of double-stranded DNA segments.

Authors:  J J Rossi; R Kierzek; T Huang; P A Walker; K Itakura
Journal:  J Biol Chem       Date:  1982-08-25       Impact factor: 5.157

6.  A mushroom-inducing DNA sequence isolated from the Basidiomycete, Schizophyllum commune.

Authors:  J S Horton; C A Raper
Journal:  Genetics       Date:  1991-11       Impact factor: 4.562

Review 7.  Total synthesis of a gene.

Authors:  H G Khorana
Journal:  Science       Date:  1979-02-16       Impact factor: 47.728

8.  Two types of linkage between codon usage and gene-expression levels.

Authors:  T Nakamura; A Suyama; A Wada
Journal:  FEBS Lett       Date:  1991-09-02       Impact factor: 4.124

9.  Total synthesis of a gene for bovine rhodopsin.

Authors:  L Ferretti; S S Karnik; H G Khorana; M Nassal; D D Oprian
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

10.  Action pattern of xylo-oligosaccharide hydrolysis by Schizophyllum commune xylanase A.

Authors:  M R Bray; A J Clarke
Journal:  Eur J Biochem       Date:  1992-02-15
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  1 in total

1.  Cellobiohydrolase B, a second exo-cellobiohydrolase from the cellulolytic bacterium Cellulomonas fimi.

Authors:  H Shen; N R Gilkes; D G Kilburn; R C Miller; R A Warren
Journal:  Biochem J       Date:  1995-10-01       Impact factor: 3.857

  1 in total

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