Literature DB >> 8169959

The complete nucleotide sequence and gene organization of carp (Cyprinus carpio) mitochondrial genome.

Y S Chang1, F L Huang, T B Lo.   

Abstract

The complete sequence of the carp mitochondrial genome of 16,575 base pairs has been determined. The carp mitochondrial genome encodes the same set of genes (13 proteins, 2 rRNAs, and 22 tRNAs) as do other vertebrate mitochondrial DNAs. Comparison of this teleostean mitochondrial genome with those of other vertebrates reveals a similar gene order and compact genomic organization. The codon usage of proteins of carp mitochondrial genome is similar to that of other vertebrates. The phylogenetic relationship for mitochondrial protein genes is more apparent than that for the mitochondrial tRNA and rRNA genes.

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Year:  1994        PMID： 8169959     DOI： 10.1007/bf00166161

Source DB:  PubMed          Journal:  J Mol Evol        ISSN： 0022-2844            Impact factor:   2.395


  26 in total

1.  Sequence and gene organization of the chicken mitochondrial genome. A novel gene order in higher vertebrates.

Authors:  P Desjardins; R Morais
Journal:  J Mol Biol       Date:  1990-04-20       Impact factor: 5.469

2.  The secondary structures of the Xenopus laevis and human mitochondrial small ribosomal subunit RNA are similar.

Authors:  D Dunon-Bluteau; G Brun
Journal:  FEBS Lett       Date:  1986-03-31       Impact factor: 4.124

3.  Isolation of mammalian mitochondrial DNA and RNA and cloning of the mitochondrial genome.

Authors:  D P Tapper; R A Van Etten; D A Clayton
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

4.  Precise identification of individual promoters for transcription of each strand of human mitochondrial DNA.

Authors:  D D Chang; D A Clayton
Journal:  Cell       Date:  1984-03       Impact factor: 41.582

5.  The complete nucleotide sequence of the Rattus norvegicus mitochondrial genome: cryptic signals revealed by comparative analysis between vertebrates.

Authors:  G Gadaleta; G Pepe; G De Candia; C Quagliariello; E Sbisà; C Saccone
Journal:  J Mol Evol       Date:  1989-06       Impact factor: 2.395

6.  Identification of initiation sites for transcription of Xenopus laevis mitochondrial DNA.

Authors:  D F Bogenhagen; B K Yoza; S S Cairns
Journal:  J Biol Chem       Date:  1986-06-25       Impact factor: 5.157

7.  Duplication and remoulding of tRNA genes during the evolutionary rearrangement of mitochondrial genomes.

Authors:  P Cantatore; M N Gadaleta; M Roberti; C Saccone; A C Wilson
Journal:  Nature       Date:  1987 Oct 29-Nov 4       Impact factor: 49.962

8.  Cloning, physical mapping and genome organization of mitochondrial DNA from Cyprinus carpio oocytes.

Authors:  A Araya; R Amthauer; G Leon; M Krauskopf
Journal:  Mol Gen Genet       Date:  1984

9.  Sequence of tRNA(Thr) and tRNA(Pro) from white sturgeon (Acipenser transmontanus) mitochondria.

Authors:  T L Gilbert; J R Brown; P J O'Hara; N E Buroker; A T Beckenbach; M J Smith
Journal:  Nucleic Acids Res       Date:  1988-12-23       Impact factor: 16.971

10.  Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis.

Authors:  D R Foran; J E Hixson; W M Brown
Journal:  Nucleic Acids Res       Date:  1988-07-11       Impact factor: 16.971
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  42 in total

1.  Mitochondrial evidence on the phylogenetic position of caecilians (Amphibia: Gymnophiona).

Authors:  R Zardoya; A Meyer
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

Review 2.  Genomic biodiversity, phylogenetics and coevolution in proteins.

Authors:  David D Pollock
Journal:  Appl Bioinformatics       Date:  2002

3.  Model of amino acid substitution in proteins encoded by mitochondrial DNA.

Authors:  J Adachi; M Hasegawa
Journal:  J Mol Evol       Date:  1996-04       Impact factor: 2.395

4.  Complete mitochondrial genome suggests diapsid affinities of turtles.

Authors:  R Zardoya; A Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-24       Impact factor: 11.205

5.  The complete mitochondrial genome of the wallaroo (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria.

Authors:  A Janke; X Xu; U Arnason
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

6.  Patterns of nucleotide substitution in mitochondrial protein coding genes of vertebrates.

Authors:  S Kumar
Journal:  Genetics       Date:  1996-05       Impact factor: 4.562

7.  Isolation of carp cDNA clones, representing developmentally-regulated genes, using a subtractive-hybridization strategy.

Authors:  C J M Stevens; G Te Kronnie; J Samallo; H Schipper; H W J Stroband
Journal:  Rouxs Arch Dev Biol       Date:  1996-05

8.  The complete nucleotide sequence of the mitochondrial DNA of the dogfish, Scyliorhinus canicula.

Authors:  C Delarbre; N Spruyt; C Delmarre; C Gallut; V Barriel; P Janvier; V Laudet; G Gachelin
Journal:  Genetics       Date:  1998-09       Impact factor: 4.562

9.  Complete sequence of the amphioxus (Branchiostoma lanceolatum) mitochondrial genome: relations to vertebrates.

Authors:  N Spruyt; C Delarbre; G Gachelin; V Laudet
Journal:  Nucleic Acids Res       Date:  1998-07-01       Impact factor: 16.971

10.  Origin of Chinese goldfish and sequential loss of genetic diversity accompanies new breeds.

Authors:  Shu-Yan Wang; Jing Luo; Robert W Murphy; Shi-Fang Wu; Chun-Ling Zhu; Yun Gao; Ya-Ping Zhang
Journal:  PLoS One       Date:  2013-03-19       Impact factor: 3.240
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