Literature DB >> 8152415

Characterization of the chromatin structure in the upstream region of the chicken alpha-globin gene domain.

S V Razin1, C V De Moura Gallo, K Scherrer.   

Abstract

The distribution of DNase I hypersensitive sites upstream of the chicken alpha-globin gene cluster was studied. A group of hypersensitive sites with a complex pattern of tissue specificity, including erythroid-specific elements, was found at a distance of 11.5-14.5 kb upstream of the pi gene, the first gene in the cluster. The observations indicate that this area, located upstream of the block of AT-rich sequences and MAR sites (at -8 kb) and upstream of the site of permanent DNA attachment to the nuclear matrix (-3 kb), still belongs to the domain of the alpha-globin genes.

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Year:  1994        PMID： 8152415     DOI： 10.1007/bf00283418

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN： 0026-8925


  16 in total

1.  A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus.

Authors:  W C Forrester; E Epner; M C Driscoll; T Enver; M Brice; T Papayannopoulou; M Groudine
Journal:  Genes Dev       Date:  1990-10       Impact factor: 11.361

2.  Transcriptional enhancer in the vicinity of a replication origin within the 5' region of the chicken alpha-globin gene domain.

Authors:  S V Razin; Y S Vassetzky; A I Kvartskhava; N F Grinenko; G P Georgiev
Journal:  J Mol Biol       Date:  1991-02-20       Impact factor: 5.469

3.  Nuclear matrix attachment regions and topoisomerase II binding and reaction sites in the vicinity of a chicken DNA replication origin.

Authors:  S V Razin; Y S Vassetzky; R Hancock
Journal:  Biochem Biophys Res Commun       Date:  1991-05-31       Impact factor: 3.575

4.  The presence of sequence-specific protein binding sites correlate with replication activity and matrix binding in a 1.7 Kb-long DNA fragment of the chicken alpha-globin gene domain.

Authors:  C V de Moura Gallo; Y S Vassetzky; F R Targa; G P Georgiev; K Scherrer; S V Razin
Journal:  Biochem Biophys Res Commun       Date:  1991-08-30       Impact factor: 3.575

Review 5.  Nuclease hypersensitive sites in chromatin.

Authors:  D S Gross; W T Garrard
Journal:  Annu Rev Biochem       Date:  1988       Impact factor: 23.643

6.  [Localization of regions of DNA attachment to the nuclear skeleton within chicken alpha-globin genes in functionally active and functionally inactive nuclei].

Authors:  S V Razin; J Rzeszowska-Wolny; J Moreau; K Scherrer
Journal:  Mol Biol (Mosk)       Date:  1985 Mar-Apr

7.  The 87A7 chromomere. Identification of novel chromatin structures flanking the heat shock locus that may define the boundaries of higher order domains.

Authors:  A Udvardy; E Maine; P Schedl
Journal:  J Mol Biol       Date:  1985-09-20       Impact factor: 5.469

8.  Replication origins are attached to the nuclear skeleton.

Authors:  S V Razin; M G Kekelidze; E M Lukanidin; K Scherrer; G P Georgiev
Journal:  Nucleic Acids Res       Date:  1986-10-24       Impact factor: 16.971

9.  Non-random cleavage of SV40 DNA in the compact minichromosome and free in solution by micrococcal nuclease.

Authors:  S A Nedospasov; G P Georgiev
Journal:  Biochem Biophys Res Commun       Date:  1980-01-29       Impact factor: 3.575

10.  Position-independent, high-level expression of the human beta-globin gene in transgenic mice.

Authors:  F Grosveld; G B van Assendelft; D R Greaves; G Kollias
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582
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  6 in total

1.  Chicken alpha-globin gene cluster is preceded by the nonerythroid-specific gene, the beginning of which is colocated with the replication origin.

Authors:  N Sjakste; O V Iarovaia; T Sjakste; S V Razin; E S Ioudinkova
Journal:  Dokl Biochem Biophys       Date:  2003 Jan-Feb       Impact factor: 0.788

2.  A CTCF-dependent silencer located in the differentially methylated area may regulate expression of a housekeeping gene overlapping a tissue-specific gene domain.

Authors:  Denis Klochkov; Héctor Rincón-Arano; Elena S Ioudinkova; Viviana Valadez-Graham; Alexey Gavrilov; Félix Recillas-Targa; Sergey V Razin
Journal:  Mol Cell Biol       Date:  2006-03       Impact factor: 4.272

3.  Excision close to matrix attachment regions of the entire chicken alpha-globin gene domain by nuclease S1 and characterization of the framing structures.

Authors:  F R Targa; S V Razin; C V de Moura Gallo; K Scherrer
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

4.  Activation of the alpha-globin gene expression correlates with dramatic upregulation of nearby non-globin genes and changes in local and large-scale chromatin spatial structure.

Authors:  Sergey V Ulianov; Aleksandra A Galitsyna; Ilya M Flyamer; Arkadiy K Golov; Ekaterina E Khrameeva; Maxim V Imakaev; Nezar A Abdennur; Mikhail S Gelfand; Alexey A Gavrilov; Sergey V Razin
Journal:  Epigenetics Chromatin       Date:  2017-07-11       Impact factor: 4.954

5.  TMEM8 - a non-globin gene entrapped in the globin web.

Authors:  Elena S Philonenko; Denis B Klochkov; Victoria V Borunova; Alexey A Gavrilov; Sergey V Razin; Olga V Iarovaia
Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

6.  Spatial configuration of the chicken alpha-globin gene domain: immature and active chromatin hubs.

Authors:  Alexey A Gavrilov; Sergey V Razin
Journal:  Nucleic Acids Res       Date:  2008-07-11       Impact factor: 16.971
  6 in total

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