Literature DB >> 8146272

ESR and ENDOR study of single crystals of deoxyadenosine monohydrate X-irradiated at 10 K.

D M Close1, W H Nelson, E Sagstuen, E O Hole.   

Abstract

Five free radicals have been detected by detailed ESR/ENDOR experiments on single crystals of deoxyadenosine monohydrate (AdRm), X-irradiated and observed at 10 K. In a previous study of adenosine (Radiat. Res. 117, 367-378, 1989), only the anion (protonated at N3) and the cation (deprotonated at the exocyclic NH2) were detected at 10 K. In AdRm, Radical R1 is the N3-protonated anion, similar to that observed previously in adenosine. Radical R3 is a C5' hydroxyalkyl radical formed by net H-abstraction from C5'. A second sugar radical is formed by net C1' H-abstraction. Two other base radicals observed in AdRm at 10 K are the C2 and C8 H-addition radicals. The C2 H-addition radical (Radical R5) exhibits inequivalent methylene hydrogen couplings of 5.43 and 3.29 mT, while in the C8 H-addition radical (Radical R6) the couplings are somewhat more equivalent (3.63 and 4.17 mT). No link between RAdical R1 and the H-addition radicals has been observed. The reduced base appears to protonate rapidly even at 10 K, while at the same time both H-addition radicals are clearly present. On warming, Radical R1 appears to decay at about 80 K with no apparent successor. Although no base cation was stabilized in AdRm at 10 K, it is interesting to note that Radicals R3 and R4 could both be formed as the result of deprotonation of primary oxidation products.

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Year:  1994        PMID: 8146272

Source DB:  PubMed          Journal:  Radiat Res        ISSN: 0033-7587            Impact factor:   2.841


  6 in total

1.  Structure of radicals from X-irradiated guanine derivatives: an experimental and computational study of sodium guanosine dihydrate single crystals.

Authors:  Nayana Jayatilaka; William H Nelson
Journal:  J Phys Chem B       Date:  2007-02-01       Impact factor: 2.991

2.  π- vs σ-radical states of one-electron-oxidized DNA/RNA bases: a density functional theory study.

Authors:  Anil Kumar; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2013-09-19       Impact factor: 2.991

3.  Direct formation of the C5'-radical in the sugar-phosphate backbone of DNA by high-energy radiation.

Authors:  Amitava Adhikary; David Becker; Brian J Palmer; Alicia N Heizer; Michael D Sevilla
Journal:  J Phys Chem B       Date:  2012-05-14       Impact factor: 2.991

4.  Excess electron trapping in duplex DNA: long range transfer via stacked adenines.

Authors:  Paul J Black; William A Bernhard
Journal:  J Phys Chem B       Date:  2012-10-24       Impact factor: 2.991

5.  Effect of base stacking on the acid-base properties of the adenine cation radical [A*+] in solution: ESR and DFT studies.

Authors:  Amitava Adhikary; Anil Kumar; Deepti Khanduri; Michael D Sevilla
Journal:  J Am Chem Soc       Date:  2008-07-09       Impact factor: 15.419

6.  C5'- and C3'-sugar radicals produced via photo-excitation of one-electron oxidized adenine in 2'-deoxyadenosine and its derivatives.

Authors:  Amitava Adhikary; David Becker; Sean Collins; Jessica Koppen; Michael D Sevilla
Journal:  Nucleic Acids Res       Date:  2006-03-14       Impact factor: 16.971

  6 in total

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