Literature DB >> 8129868

Elasticity of globular proteins. The relation between mechanics, thermodynamics and mobility.

V N Morozov1.   

Abstract

An analysis of elasticity of lysozyme and myoglobin crystals in terms of thermodynamics has revealed a direct relation between entropy and enthalpy of deformation and delta S* and delta H* terms in the standard free energy change in proteins, delta G(o), (K.P. Murphy, P.L. Privalov, S.J. Gill (1990) Science 247, 559-561), so that at any temperature (between the glass-transition and denaturation temperatures) free energy of deformation is proportional to the hydration independent part of delta G(o). Both energies are characterized with large enthalpy-entropy compensation and tend to zero at the same temperature, Tm = (delta H*/delta S*) = 353 +/- 20 K. Large positive entropy contribution to deformation energy causes large linear decrease in protein elasticity, and increase in thermal mobility of protein atoms with temperature. Being plotted in inverse coordinates, temperature dependence of the mean-square amplitudes, obtained in neutron and mossbauer experiments as well as in molecular dynamic simulations, gives the same 353 +/- 10 K for the temperature, where the amplitudes tend to infinity. Mechanism explaining large positive entropy contribution in deformation energy of native protein molecules presumably involves emergence of more room for motion of protein side-chain groups squeezed between alpha-helices and other rigid skeleton elements, when precise packing of atoms in native protein molecule is distorted as a result of deformation.

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Year:  1993        PMID: 8129868     DOI: 10.1080/07391102.1993.10508010

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  8 in total

Review 1.  Protein compressibility, dynamics, and pressure.

Authors:  D P Kharakoz
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

2.  The old problems of glass and the glass transition, and the many new twists.

Authors:  C A Angell
Journal:  Proc Natl Acad Sci U S A       Date:  1995-07-18       Impact factor: 11.205

3.  Sound velocity and elasticity of tetragonal lysozyme crystals by Brillouin spectroscopy.

Authors:  S Speziale; F Jiang; C L Caylor; S Kriminski; C-S Zha; R E Thorne; T S Duffy
Journal:  Biophys J       Date:  2003-11       Impact factor: 4.033

4.  Atomic force microscopy study of the secretory granule lumen.

Authors:  V Parpura; J M Fernandez
Journal:  Biophys J       Date:  1996-11       Impact factor: 4.033

Review 5.  Principles of protein folding--a perspective from simple exact models.

Authors:  K A Dill; S Bromberg; K Yue; K M Fiebig; D P Yee; P D Thomas; H S Chan
Journal:  Protein Sci       Date:  1995-04       Impact factor: 6.725

6.  Mechanical deformation enhances catalytic activity of crystalline carboxypeptidase A.

Authors:  T A Zenchenko; V N Morozov
Journal:  Protein Sci       Date:  1995-02       Impact factor: 6.725

7.  Hydrogen-bonding classes in proteins and their contribution to the unfolding reaction.

Authors:  R Ragone
Journal:  Protein Sci       Date:  2001-10       Impact factor: 6.725

8.  The kinetics of L-selectin tethers and the mechanics of selectin-mediated rolling.

Authors:  R Alon; S Chen; K D Puri; E B Finger; T A Springer
Journal:  J Cell Biol       Date:  1997-09-08       Impact factor: 10.539

  8 in total

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