Literature DB >> 8129708

Site and significance of chemically modifiable cysteine residues in glutamate dehydrogenase of Clostridium symbiosum and the use of protection studies to measure coenzyme binding.

S E Syed1, D P Hornby, P E Brown, J E Fitton, P C Engel.   

Abstract

Protein chemical studies of NAD(+)-dependent glutamate dehydrogenase (GDH; EC 1.4.1.2) from Clostridium symbiosum indicate only two cysteine residues/subunit, in good agreement with the gene sequence. Experiments with various thiol-modifying reagents reveal that in native clostridial GDH only one of these two cysteines is accessible for reaction. This residue does not react with iodoacetate, iodoacetamide, N-ethylmaleimide or N-phenylmaleimide, but reaction with either p-chloromercuribenzene sulphonate or 5,5'-dithiobis(2-nitrobenzoic acid) causes complete inactivation, preventable by NAD+ or NADH but not by glutamate or 2-oxoglutarate. Protection studies with combinations of substrates show that glutamate enhances protection by NADH, whereas 2-oxoglutarate diminishes it. These studies were also used to determine a dissociation constant (0.69 mM) for the enzyme-NAD+ complex. Similar data for NADH indicated mildly cooperative binding with a Hill coefficient of 1.32. The significance of these results is discussed in the light of the high-resolution crystallographic structure for clostridial GDH and in relation to information for GDH from other sources.

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Year:  1994        PMID: 8129708      PMCID: PMC1137989          DOI: 10.1042/bj2980107

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  30 in total

1.  The glutamate dehydrogenase gene of Clostridium symbiosum. Cloning by polymerase chain reaction, sequence analysis and over-expression in Escherichia coli.

Authors:  J K Teller; R J Smith; M J McPherson; P C Engel; J R Guest
Journal:  Eur J Biochem       Date:  1992-05-15

2.  Recent progress on the structure and function of glutamate dehydrogenase.

Authors:  P J Baker; G W Farrants; D W Rice; T J Stillman
Journal:  Biochem Soc Trans       Date:  1987-08       Impact factor: 5.407

3.  The crystal structure of glutamate dehydrogenase from Clostridium symbiosum at 0.6 nm resolution.

Authors:  D W Rice; P J Baker; G W Farrants; D P Hornby
Journal:  Biochem J       Date:  1987-03-15       Impact factor: 3.857

4.  Complete nucleotide sequence of the glutamate dehydrogenase gene from Escherichia coli K-12.

Authors:  F Valle; B Becerril; E Chen; P Seeburg; H Heyneker; F Bolivar
Journal:  Gene       Date:  1984-02       Impact factor: 3.688

5.  Complete nucleotide sequence of the Escherichia coli gdhA gene.

Authors:  M J McPherson; J C Wootton
Journal:  Nucleic Acids Res       Date:  1983-08-11       Impact factor: 16.971

6.  A pH-dependent activation-inactivation equilibrium in glutamate dehydrogenase of Clostridium symbiosum.

Authors:  S E Syed; P C Engel
Journal:  Biochem J       Date:  1990-10-15       Impact factor: 3.857

7.  Subunit assembly and active site location in the structure of glutamate dehydrogenase.

Authors:  P J Baker; K L Britton; P C Engel; G W Farrants; K S Lilley; D W Rice; T J Stillman
Journal:  Proteins       Date:  1992-01

8.  The partial amino acid sequence of the NAD(+)-dependent glutamate dehydrogenase of Clostridium symbiosum: implications for the evolution and structural basis of coenzyme specificity.

Authors:  K S Lilley; P J Baker; K L Britton; T J Stillman; P E Brown; A J Moir; P C Engel; D W Rice; J E Bell; E Bell
Journal:  Biochim Biophys Acta       Date:  1991-11-15

9.  Functional studies of a glutamate dehydrogenase with known three-dimensional structure: steady-state kinetics of the forward and reverse reactions catalysed by the NAD(+)-dependent glutamate dehydrogenase of Clostridium symbiosum.

Authors:  S E Syed; P C Engel; D M Parker
Journal:  Biochim Biophys Acta       Date:  1991-12-06

10.  The protein sequence of glutamate dehydrogenase from Sulfolobus solfataricus, a thermoacidophilic archaebacterium. Is the presence of N-epsilon-methyllysine related to thermostability?

Authors:  B Maras; V Consalvi; R Chiaraluce; L Politi; M De Rosa; F Bossa; R Scandurra; D Barra
Journal:  Eur J Biochem       Date:  1992-01-15
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  5 in total

1.  Allosteric behaviour of 1:5 hybrids of mutant subunits of Clostridium symbiosum glutamate dehydrogenase differing in their amino acid specificity.

Authors:  A Goyal; X G Wang; P C Engel
Journal:  Biochem J       Date:  2001-12-15       Impact factor: 3.857

2.  Chemical rescue of the catalytically disabled clostridial glutamate dehydrogenase mutant D165S by fluoride ion.

Authors:  B M Hayden; J L Dean; S R Martin; P C Engel
Journal:  Biochem J       Date:  1999-06-01       Impact factor: 3.857

3.  The catalytic role of aspartate in the active site of glutamate dehydrogenase.

Authors:  J L Dean; X G Wang; J K Teller; M L Waugh; K L Britton; P J Baker; T J Stillman; S R Martin; D W Rice; P C Engel
Journal:  Biochem J       Date:  1994-07-01       Impact factor: 3.857

4.  Urea-induced inactivation and denaturation of clostridial glutamate dehydrogenase: the absence of stable dimeric or trimeric intermediates.

Authors:  S A Aghajanian; S R Martin; P C Engel
Journal:  Biochem J       Date:  1995-11-01       Impact factor: 3.857

5.  The -SH Protection Method for Determining Accurate K(d) Values for Enzyme-Coenzyme Complexes of NAD-Dependent Glutamate Dehydrogenase and Engineered Mutants: Evidence for Nonproductive NADPH Complexes.

Authors:  Joanna Griffin; Paul C Engel
Journal:  Enzyme Res       Date:  2010-06-29
  5 in total

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