Literature DB >> 10333502

Chemical rescue of the catalytically disabled clostridial glutamate dehydrogenase mutant D165S by fluoride ion.

B M Hayden1, J L Dean, S R Martin, P C Engel.   

Abstract

The catalytically disabled Asp165-->Ser mutant of clostridial glutamate dehydrogenase shows 100000-fold less activity than the wild-type (WT) enzyme in a standard glutamate oxidation assay and 1000-fold less activity in the reductive-amination reaction. The large reduction in the rate has been attributed to removal of the negative charge and the postulated proton-donor capacity of the aspartate carboxyl group. However, fluoride ion (1 M NaF) causes a 1000-fold activation of the mutant enzyme while simultaneously inhibiting WT activity by 20-fold in the forward reaction. For the reverse reaction, F- (1 M) activates the mutant 4-fold and inhibits WT activity to approx. 64%. The net result when 1 M F- is present is a decrease in the WT:mutant activity ratio from 100000 to 5 for the forward reaction. None of the other halides tested, nor NO3(-), CHCOO- or HCOO-, give comparable activation. Re-activation took 15-30 s under assay conditions, suggesting the possibility of conformational change; CD spectroscopy, however, provided no evidence of a substantial change and kinetics of modification using 5,5'-dithiobis(2-nitrobenzoic acid) suggested only subtle structural rearrangement. This phenomenon is discussed in the light of available information about the structure of the mutant enzyme. It is suggested that the F- ion provides a fixed negative charge at the position of the missing aspartate carboxyl group. Therefore, this appears to be an example of 'chemical rescue'.

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Year:  1999        PMID: 10333502      PMCID: PMC1220284     

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  19 in total

1.  Statistical estimations in enzyme kinetics.

Authors:  G N WILKINSON
Journal:  Biochem J       Date:  1961-08       Impact factor: 3.857

2.  Direct Brønsted analysis of the restoration of activity to a mutant enzyme by exogenous amines.

Authors:  M D Toney; J F Kirsch
Journal:  Science       Date:  1989-03-17       Impact factor: 47.728

3.  One-dimensional gel electrophoresis.

Authors:  D E Garfin
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

4.  The glutamate dehydrogenase gene of Clostridium symbiosum. Cloning by polymerase chain reaction, sequence analysis and over-expression in Escherichia coli.

Authors:  J K Teller; R J Smith; M J McPherson; P C Engel; J R Guest
Journal:  Eur J Biochem       Date:  1992-05-15

5.  Recent progress on the structure and function of glutamate dehydrogenase.

Authors:  P J Baker; G W Farrants; D W Rice; T J Stillman
Journal:  Biochem Soc Trans       Date:  1987-08       Impact factor: 5.407

6.  Determination of the chemical mechanism of glutamate dehydrogenase from pH studies.

Authors:  J E Rife; W W Cleland
Journal:  Biochemistry       Date:  1980-05-27       Impact factor: 3.162

7.  A pH-dependent activation-inactivation equilibrium in glutamate dehydrogenase of Clostridium symbiosum.

Authors:  S E Syed; P C Engel
Journal:  Biochem J       Date:  1990-10-15       Impact factor: 3.857

8.  Subunit assembly and active site location in the structure of glutamate dehydrogenase.

Authors:  P J Baker; K L Britton; P C Engel; G W Farrants; K S Lilley; D W Rice; T J Stillman
Journal:  Proteins       Date:  1992-01

9.  Functional studies of a glutamate dehydrogenase with known three-dimensional structure: steady-state kinetics of the forward and reverse reactions catalysed by the NAD(+)-dependent glutamate dehydrogenase of Clostridium symbiosum.

Authors:  S E Syed; P C Engel; D M Parker
Journal:  Biochim Biophys Acta       Date:  1991-12-06

10.  Conformational flexibility in glutamate dehydrogenase. Role of water in substrate recognition and catalysis.

Authors:  T J Stillman; P J Baker; K L Britton; D W Rice
Journal:  J Mol Biol       Date:  1993-12-20       Impact factor: 5.469

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