Literature DB >> 8125064

The Pearson product-moment correlation coefficient is better suited for identification of DNA fingerprint profiles than band matching algorithms.

B G Häne1, K Jäger, H G Drexler.   

Abstract

A database of DNA fingerprint profiles from permanently established human and animal cell lines was prepared with a computer program originally designed for numerical taxonomy of bacteria. Identifications of cell line DNA profiles were performed, both by the Pearson product-moment correlation coefficient and by band matching. Under the conditions used the Pearson product-moment correlation coefficient was consistently more reliable.

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Year:  1993        PMID： 8125064     DOI： 10.1002/elps.11501401154

Source DB:  PubMed          Journal:  Electrophoresis        ISSN： 0173-0835            Impact factor:   3.535


  36 in total

1.  Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil.

Authors:  J C Cho; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  2000-12       Impact factor: 4.792

2.  Spatial variation in Streptomyces genetic composition and diversity in a prairie soil.

Authors:  A L Davelos; K Xiao; D A Samac; A P Martin; L L Kinkel
Journal:  Microb Ecol       Date:  2004-10-28       Impact factor: 4.552

3.  Effect of fumarate reducing bacteria on in vitro rumen fermentation, methane mitigation and microbial diversity.

Authors:  Lovelia Mamuad; Seon Ho Kim; Chang Dae Jeong; Yeon Jae Choi; Che Ok Jeon; Sang-Suk Lee
Journal:  J Microbiol       Date:  2014-02-01       Impact factor: 3.422

4.  Genotypic characterization of Bradyrhizobium strains nodulating endemic woody legumes of the Canary Islands by PCR-restriction fragment length polymorphism analysis of genes encoding 16S rRNA (16S rDNA) and 16S-23S rDNA intergenic spacers, repetitive extragenic palindromic PCR genomic fingerprinting, and partial 16S rDNA sequencing.

Authors:  P Vinuesa; J L Rademaker; F J de Bruijn; D Werner
Journal:  Appl Environ Microbiol       Date:  1998-06       Impact factor: 4.792

5.  Reduction in diversity of the colonic mucosa associated bacterial microflora in patients with active inflammatory bowel disease.

Authors:  S J Ott; M Musfeldt; D F Wenderoth; J Hampe; O Brant; U R Fölsch; K N Timmis; S Schreiber
Journal:  Gut       Date:  2004-05       Impact factor: 23.059

6.  Sample size, library composition, and genotypic diversity among natural populations of Escherichia coli from different animals influence accuracy of determining sources of fecal pollution.

Authors:  LeeAnn K Johnson; Mary B Brown; Ethan A Carruthers; John A Ferguson; Priscilla E Dombek; Michael J Sadowsky
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

7.  Fluorescent amplified fragment length polymorphism and repetitive extragenic palindrome-PCR fingerprinting reveal host-specific genetic diversity of Vibrio halioticoli-like strains isolated from the gut of Japanese abalone.

Authors:  Tomoo Sawabe; Fabiano L Thompson; Jeroen Heyrman; Margo Cnockaert; Karin Hayashi; Reiji Tanaka; Mamoru Yoshimizu; Bart Hoste; Jean Swings; Yoshio Ezura
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

8.  High diversity among environmental Escherichia coli isolates from a bovine feedlot.

Authors:  Hsiao-Hui Yang; Robert T Vinopal; Domenico Grasso; Barth F Smets
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

9.  Performance assessment of DNA fragment sizing by high-sensitivity flow cytometry and pulsed-field gel electrophoresis.

Authors:  Matthew M Ferris; Xiaomei Yan; Robbert C Habbersett; Yulin Shou; Cheryl L Lemanski; James H Jett; Thomas M Yoshida; Babetta L Marrone
Journal:  J Clin Microbiol       Date:  2004-05       Impact factor: 5.948

10.  Tracking functional guilds: "Dehalococcoides" spp. in European river basins contaminated with hexachlorobenzene.

Authors:  Neslihan Tas; Miriam H A van Eekert; Gosse Schraa; Jizhong Zhou; Willem M de Vos; Hauke Smidt
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792
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