Literature DB >> 8122995

DNA fingerprint analysis of a free-range koala population.

P Timms1, J Kato, M Maugeri, N White.   

Abstract

Thirty-six koalas in a free-range Queensland population were fingerprinted using an M13 probe in combination with MspI digestion. The technique was found to be highly repeatable, with estimates of 0.1-1.6% within-gel error and 0.1-2.5% between-gel error. Of the 43 different-size fingerprint bands produced in the population, only 2 bands were common to all 36 koalas. Ten bands were quite rare, occurring at a frequency of 0.2 or less. All 36 koalas had unique DNA fingerprints (probability of 1.88 x 10(-7)), which enabled them each to be uniquely identified. Despite this, there was still a high level of band sharing in the population (mean number of shared bands = 0.749). This level is much higher than that reported for humans, birds, cats, dogs, and cattle but not as high as that reported previously for Victorian koalas. This lack of genetic variation may influence the ability of the population to respond to stress situations, such as lack of food, habitat destruction, and disease.

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Year:  1993        PMID: 8122995     DOI: 10.1007/bf02396223

Source DB:  PubMed          Journal:  Biochem Genet        ISSN: 0006-2928            Impact factor:   1.890


  16 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

3.  Individual-specific 'fingerprints' of human DNA.

Authors:  A J Jeffreys; V Wilson; S L Thein
Journal:  Nature       Date:  1985 Jul 4-10       Impact factor: 49.962

4.  A hypervariable region 3' to the human apolipoprotein B gene.

Authors:  T J Knott; S C Wallis; R J Pease; L M Powell; J Scott
Journal:  Nucleic Acids Res       Date:  1986-11-25       Impact factor: 16.971

5.  M13 repeat probe detects DNA minisatellite-like sequences in gymnosperms and angiosperms.

Authors:  S H Rogstad; J C Patton; B A Schaal
Journal:  Proc Natl Acad Sci U S A       Date:  1988-12       Impact factor: 11.205

6.  The highly polymorphic region near the human insulin gene is composed of simple tandemly repeating sequences.

Authors:  G I Bell; M J Selby; W J Rutter
Journal:  Nature       Date:  1982-01-07       Impact factor: 49.962

7.  A highly polymorphic locus in human DNA.

Authors:  A R Wyman; R White
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

8.  Positive identification of an immigration test-case using human DNA fingerprints.

Authors:  A J Jeffreys; J F Brookfield; R Semeonoff
Journal:  Nature       Date:  1985 Oct 31-Nov 6       Impact factor: 49.962

9.  DNA "fingerprinting" reveals high levels of inbreeding in colonies of the eusocial naked mole-rat.

Authors:  H K Reeve; D F Westneat; W A Noon; P W Sherman; C F Aquadro
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

10.  Conservation genetics of the koala (Phascolarctos cinereus). II. Limited variability in minisatellite DNA sequences.

Authors:  A C Taylor; J A Graves; N D Murray; W B Sherwin
Journal:  Biochem Genet       Date:  1991-08       Impact factor: 1.890

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  2 in total

1.  Historically low mitochondrial DNA diversity in koalas (Phascolarctos cinereus).

Authors:  Kyriakos Tsangaras; María C Ávila-Arcos; Yasuko Ishida; Kristofer M Helgen; Alfred L Roca; Alex D Greenwood
Journal:  BMC Genet       Date:  2012-10-24       Impact factor: 2.797

2.  Genomic comparisons reveal biogeographic and anthropogenic impacts in the koala (Phascolarctos cinereus): a dietary-specialist species distributed across heterogeneous environments.

Authors:  Shannon R Kjeldsen; Herman W Raadsma; Kellie A Leigh; Jennifer R Tobey; David Phalen; Andrew Krockenberger; William A Ellis; Emily Hynes; Damien P Higgins; Kyall R Zenger
Journal:  Heredity (Edinb)       Date:  2018-09-12       Impact factor: 3.821

  2 in total

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