Literature DB >> 8113164

Genes coding for the selenocysteine-inserting tRNA species from Desulfomicrobium baculatum and Clostridium thermoaceticum: structural and evolutionary implications.

P Tormay1, R Wilting, J Heider, A Böck.   

Abstract

The genes (selC) coding for the selenocysteine-inserting tRNA species (tRNA(Sec)) from Clostridium thermoaceticum and Desulfomicrobium baculatum were cloned and sequenced. Although they differ in numerous positions from the sequence of the Escherichia coli selC gene, they were able to complement the selC lesion of an E. coli mutant and to promote selenoprotein formation in the heterologous host. The tRNA(Sec) species from both organisms possess all of the unique primary, secondary, and tertiary structural features exhibited by E. coli tRNA(Sec) (C. Baron, E. Westhof, A. Böck, and R. Giegé, J. Mol. Biol. 231:274-292, 1993). The structural and functional properties of the tRNA(Sec) species from prokaryotes analyzed thus far support the notion that tRNA(Sec) may be an evolutionarily conserved structure whose function in the primordial genetic code was to decode UGA with selenocysteine.

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Year:  1994        PMID: 8113164      PMCID: PMC205188          DOI: 10.1128/jb.176.5.1268-1274.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  23 in total

1.  Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

Authors:  A C Chang; S N Cohen
Journal:  J Bacteriol       Date:  1978-06       Impact factor: 3.490

2.  Mutagenesis of selC, the gene for the selenocysteine-inserting tRNA-species in E. coli: effects on in vivo function.

Authors:  C Baron; J Heider; A Böck
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

3.  Catalytic properties of an Escherichia coli formate dehydrogenase mutant in which sulfur replaces selenium.

Authors:  M J Axley; A Böck; T C Stadtman
Journal:  Proc Natl Acad Sci U S A       Date:  1991-10-01       Impact factor: 11.205

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

Review 5.  Selenium metabolism in micro-organisms.

Authors:  J Heider; A Böck
Journal:  Adv Microb Physiol       Date:  1993       Impact factor: 3.517

6.  Formate dehydrogenase, a selenium--tungsten enzyme from Clostridium thermoaceticum.

Authors:  L G Ljungdahl; J R Andreesen
Journal:  Methods Enzymol       Date:  1978       Impact factor: 1.600

7.  Selenocysteine tRNA[Ser]Sec gene is ubiquitous within the animal kingdom.

Authors:  B J Lee; M Rajagopalan; Y S Kim; K H You; K B Jacobson; D Hatfield
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

8.  Construction and characterization of new cloning vehicles. II. A multipurpose cloning system.

Authors:  F Bolivar; R L Rodriguez; P J Greene; M C Betlach; H L Heyneker; H W Boyer; J H Crosa; S Falkow
Journal:  Gene       Date:  1977       Impact factor: 3.688

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

Review 10.  Selenocysteine: the 21st amino acid.

Authors:  A Böck; K Forchhammer; J Heider; W Leinfelder; G Sawers; B Veprek; F Zinoni
Journal:  Mol Microbiol       Date:  1991-03       Impact factor: 3.501

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  5 in total

1.  Barriers to heterologous expression of a selenoprotein gene in bacteria.

Authors:  P Tormay; A Böck
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

2.  Complete genome sequence of Desulfomicrobium baculatum type strain (X).

Authors:  Alex Copeland; Stefan Spring; Markus Göker; Susanne Schneider; Alla Lapidus; Tijana Glavina Del Rio; Hope Tice; Jan-Fang Cheng; Feng Chen; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavrommatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia C Jeffries; Linda Meincke; David Sims; Thomas Brettin; John C Detter; Cliff Han; Patrick Chain; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Susan Lucas
Journal:  Stand Genomic Sci       Date:  2009-07-20

3.  Antideterminants present in minihelix(Sec) hinder its recognition by prokaryotic elongation factor Tu.

Authors:  J Rudinger; R Hillenbrandt; M Sprinzl; R Giegé
Journal:  EMBO J       Date:  1996-02-01       Impact factor: 11.598

4.  Genomics of Clostridium taeniosporum, an organism which forms endospores with ribbon-like appendages.

Authors:  Joshua M Cambridge; Alexandra L Blinkova; Erick I Salvador Rocha; Addys Bode Hernández; Maday Moreno; Edwin Ginés-Candelaria; Benjamin M Goetz; Scott Hunicke-Smith; Ed Satterwhite; Haley O Tucker; James R Walker
Journal:  PLoS One       Date:  2018-01-02       Impact factor: 3.240

Review 5.  Evolving genetic code.

Authors:  Takeshi Ohama; Yuji Inagaki; Yoshitaka Bessho; Syozo Osawa
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2008       Impact factor: 3.493

  5 in total

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