Literature DB >> 8110757

Site-directed mutagenesis and oxygen isotope incorporation studies of the nucleophilic aspartate of haloalkane dehalogenase.

F Pries1, J Kingma, M Pentenga, G van Pouderoyen, C M Jeronimus-Stratingh, A P Bruins, D B Janssen.   

Abstract

Haloalkane dehalogenase catalyzes the hydrolytic cleavage of carbon-halogen bonds in a broad range of halogenated aliphatic compounds. The X-ray structure suggests that Asp124, which is located close to an internal cavity, carries out a nucleophilic attack on the C alpha of the substrate, releasing the halogen. To study the mechanism of hydrolysis, this aspartate residue was mutated to alanine, glycine, or glutamate. The mutant enzymes showed no activity toward 1,2-dichloroethane and 1,2-dibromoethane. Incubation of purified wild-type dehalogenase with 1,2-dichloroethane in the presence of H2(18)O resulted in the incorporation of 18O in 2-chloroethanol and in the carboxylate group of Asp124. This shows that the reaction proceeds by covalent catalysis with the formation of an alkyl-enzyme intermediate that is hydrolyzed by attack of solvent water on the carbonyl carbon of Asp124. On the basis of amino acid sequence similarity between haloalkane dehalogenase and epoxide hydrolases, it is proposed that a conserved aspartate residue is also involved in covalent catalysis by the latter enzymes.

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Year:  1994        PMID: 8110757     DOI: 10.1021/bi00171a026

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  12 in total

1.  Detoxification of environmental mutagens and carcinogens: structure, mechanism, and evolution of liver epoxide hydrolase.

Authors:  M A Argiriadi; C Morisseau; B D Hammock; D W Christianson
Journal:  Proc Natl Acad Sci U S A       Date:  1999-09-14       Impact factor: 11.205

2.  Expression, purification and preliminary X-ray characterization of DL-2-haloacid dehalogenase from Methylobacterium sp. CPA1.

Authors:  Rie Omi; Keiji Jitsumori; Takahiro Yamauchi; Susumu Ichiyama; Tatsuo Kurihara; Nobuyoshi Esaki; Nobuo Kamiya; Ken Hirotsu; Ikuko Miyahara
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-06-15

3.  Cloning and molecular characterization of a soluble epoxide hydrolase from Aspergillus niger that is related to mammalian microsomal epoxide hydrolase.

Authors:  M Arand; H Hemmer; H Dürk; J Baratti; A Archelas; R Furstoss; F Oesch
Journal:  Biochem J       Date:  1999-11-15       Impact factor: 3.857

4.  Catalytic function of an alpha/beta hydrolase is required for energy stress activation of the sigma(B) transcription factor in Bacillus subtilis.

Authors:  M S Brody; K Vijay; C W Price
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

5.  Bacterial 2,4-dioxygenases: new members of the alpha/beta hydrolase-fold superfamily of enzymes functionally related to serine hydrolases.

Authors:  F Fischer; S Künne; S Fetzner
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

6.  Stereochemical features of the hydrolysis of 9,10-epoxystearic acid catalysed by plant and mammalian epoxide hydrolases.

Authors:  Stephan Summerer; Abdulsamie Hanano; Shigeru Utsumi; Michael Arand; Francis Schuber; Elizabeth Blée
Journal:  Biochem J       Date:  2002-09-01       Impact factor: 3.857

Review 7.  Bacterial dehalogenases: biochemistry, genetics, and biotechnological applications.

Authors:  S Fetzner; F Lingens
Journal:  Microbiol Rev       Date:  1994-12

Review 8.  Genetics and biochemistry of 1,2-dichloroethane degradation.

Authors:  D B Janssen; J R van der Ploeg; F Pries
Journal:  Biodegradation       Date:  1994-12       Impact factor: 3.909

9.  Perspective on Diabatic Models of Chemical Reactivity as Illustrated by the Gas-Phase S(N)2 Reaction of Acetate Ion with 1,2-Dichloroethane.

Authors:  Rosendo Valero; Lingchun Song; Jiali Gao; Donald G Truhlar
Journal:  J Chem Theory Comput       Date:  2009-01-01       Impact factor: 6.006

10.  Photodegradative fate and potential phototoxic products of bromocarbazoles and chlorocarbazoles in water.

Authors:  John Mumbo; Dominik Deyerling; Bernhard Henkelmann; Gerd Pfister; Karl-Werner Schramm
Journal:  Environ Sci Pollut Res Int       Date:  2017-10-05       Impact factor: 4.223

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