Literature DB >> 8108439

Design, creation, and characterization of a stable, monomeric triosephosphate isomerase.

T V Borchert1, R Abagyan, R Jaenicke, R K Wierenga.   

Abstract

Protein engineering on trypanosomal triosephosphate isomerase (TIM) converted this oligomeric enzyme into a stable, monomeric protein that is enzymatically active. Wild-type TIM consists of two identical subunits that form a very tight dimer involving interactions of 32 residues of each subunit. By replacing 15 residues of the major interface loop by another 8-residue fragment, a variant was constructed that is a stable and monomeric protein with TIM activity. The length, sequence, and conformation of the designed fragment were suggested by extensive modeling.

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Year:  1994        PMID: 8108439      PMCID: PMC43190          DOI: 10.1073/pnas.91.4.1515

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  24 in total

1.  Evidence that the monomers of dimeric triose phosphate isomerase are active.

Authors:  C J Branford White; D A Fell
Journal:  Biochem Soc Trans       Date:  1976       Impact factor: 5.407

2.  A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions.

Authors:  R Higuchi; B Krummel; R K Saiki
Journal:  Nucleic Acids Res       Date:  1988-08-11       Impact factor: 16.971

3.  Temperature-gradient gel electrophoresis. Thermodynamic analysis of nucleic acids and proteins in purified form and in cellular extracts.

Authors:  V Rosenbaum; D Riesner
Journal:  Biophys Chem       Date:  1987-05-09       Impact factor: 2.352

4.  Kinetic properties of triose-phosphate isomerase from Trypanosoma brucei brucei. A comparison with the rabbit muscle and yeast enzymes.

Authors:  A M Lambeir; F R Opperdoes; R K Wierenga
Journal:  Eur J Biochem       Date:  1987-10-01

5.  Folding and association of triose phosphate isomerase from rabbit muscle.

Authors:  S Zabori; R Rudolph; R Jaenicke
Journal:  Z Naturforsch C Biosci       Date:  1980 Nov-Dec

6.  Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes.

Authors:  F W Studier; B A Moffatt
Journal:  J Mol Biol       Date:  1986-05-05       Impact factor: 5.469

7.  Subunit interface of triosephosphate isomerase: site-directed mutagenesis and characterization of the altered enzyme.

Authors:  J I Casal; T J Ahern; R C Davenport; G A Petsko; A M Klibanov
Journal:  Biochemistry       Date:  1987-03-10       Impact factor: 3.162

8.  Reversible dissociation of dimeric tyrosyl-tRNA synthetase by mutagenesis at the subunit interface.

Authors:  D H Jones; A J McMillan; A R Fersht; G Winter
Journal:  Biochemistry       Date:  1985-10-08       Impact factor: 3.162

9.  Monomeric insulins obtained by protein engineering and their medical implications.

Authors:  J Brange; U Ribel; J F Hansen; G Dodson; M T Hansen; S Havelund; S G Melberg; F Norris; K Norris; L Snel
Journal:  Nature       Date:  1988-06-16       Impact factor: 49.962

10.  Glycolytic enzymes of Trypanosoma brucei. Simultaneous purification, intraglycosomal concentrations and physical properties.

Authors:  O Misset; O J Bos; F R Opperdoes
Journal:  Eur J Biochem       Date:  1986-06-02
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  20 in total

1.  Thermodynamic characterization of yeast triosephosphate isomerase refolding: insights into the interplay between function and stability as reasons for the oligomeric nature of the enzyme.

Authors:  Hugo Nájera; Miguel Costas; D Alejandro Fernández-Velasco
Journal:  Biochem J       Date:  2003-03-15       Impact factor: 3.857

2.  A paradigm for enzyme-catalyzed proton transfer at carbon: triosephosphate isomerase.

Authors:  John P Richard
Journal:  Biochemistry       Date:  2012-03-20       Impact factor: 3.162

3.  When monomers are preferred: a strategy for the identification and disruption of weakly oligomerized proteins.

Authors:  Yufeng Tong; David Hughes; Lisa Placanica; Matthias Buck
Journal:  Structure       Date:  2005-01       Impact factor: 5.006

4.  Disruption of the aldolase A tetramer into catalytically active monomers.

Authors:  P T Beernink; D R Tolan
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

5.  Identification of the Serratia endonuclease dimer: structural basis and implications for catalysis.

Authors:  M D Miller; K L Krause
Journal:  Protein Sci       Date:  1996-01       Impact factor: 6.725

6.  Engineering subunit association of multisubunit proteins: a dimeric streptavidin.

Authors:  T Sano; S Vajda; C L Smith; C R Cantor
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

Review 7.  Conformational stability of dimeric proteins: quantitative studies by equilibrium denaturation.

Authors:  K E Neet; D E Timm
Journal:  Protein Sci       Date:  1994-12       Impact factor: 6.725

8.  Active site properties of monomeric triosephosphate isomerase (monoTIM) as deduced from mutational and structural studies.

Authors:  W Schliebs; N Thanki; R Eritja; R Wierenga
Journal:  Protein Sci       Date:  1996-02       Impact factor: 6.725

9.  Reflections on the catalytic power of a TIM-barrel.

Authors:  John P Richard; Xiang Zhai; M Merced Malabanan
Journal:  Bioorg Chem       Date:  2014-07-11       Impact factor: 5.275

10.  The role of quaternary interactions on the stability and activity of ascorbate peroxidase.

Authors:  D Mandelman; F P Schwarz; H Li; T L Poulos
Journal:  Protein Sci       Date:  1998-10       Impact factor: 6.725

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