Literature DB >> 8090738

Synergy in the spectral tuning of retinal pigments: complete accounting of the opsin shift in bacteriorhodopsin.

J Hu1, R G Griffin, J Herzfeld.   

Abstract

UV-visible and solid-state NMR studies of a series of 6-s-trans protonated Schiff bases of retinal with aniline show that the bathochromic shift induced by weakening the imine counterion is significantly greater in the 6-s-trans conformation than in the 6-s-cis conformation. Based on the observed magnitude of this coupling between the electronic effects of 6-s isomerization and imine counterion strength in the model compounds, the large opsin shift and unusual chemical shifts in light-adapted bacteriorhodopsin can be fully explained. These phenomena therefore do not require a negative point charge or polarizability effects in the chromophore binding pocket. The results are consistent with an effective center-to-center distance between the Schiff base and its counterion of about 4 A in light-adapted bacteriorhodopsin.

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Year:  1994        PMID: 8090738      PMCID: PMC44710          DOI: 10.1073/pnas.91.19.8880

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  12 in total

1.  Studies on rhodopsin. VIII. Retinylidenemethylamine, an indicator yellow analogue.

Authors:  G A PITT; F D COLLINS; R A MORTON; P STOK
Journal:  Biochem J       Date:  1955-01       Impact factor: 3.857

2.  The mechanism of bleaching rhodopsin.

Authors:  A KROPF; R HUBBARD
Journal:  Ann N Y Acad Sci       Date:  1959-11-12       Impact factor: 5.691

3.  Anion-induced wavelength regulation of absorption maxima of Schiff bases of retinal.

Authors:  P E Blatz; J H Mohler; H V Navangul
Journal:  Biochemistry       Date:  1972-02-29       Impact factor: 3.162

4.  Effect of solvent polarizability on the absorption spectrum of all-trans-retinylpyrrolidiniminium perchlorate.

Authors:  C S Irving; G W Byers; P A Leermakers
Journal:  J Am Chem Soc       Date:  1969-04-09       Impact factor: 15.419

5.  Solid-state 13C and 15N NMR study of the low pH forms of bacteriorhodopsin.

Authors:  H J de Groot; S O Smith; J Courtin; E van den Berg; C Winkel; J Lugtenburg; R G Griffin; J Herzfeld
Journal:  Biochemistry       Date:  1990-07-24       Impact factor: 3.162

6.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

7.  Visual-pigment spectra: implications of the protonation of the retinal Schiff base.

Authors:  B Honig; A D Greenberg; U Dinur; T G Ebrey
Journal:  Biochemistry       Date:  1976-10-19       Impact factor: 3.162

8.  Retinal has a highly dipolar vertically excited singlet state: implications for vision.

Authors:  R Mathies; L Stryer
Journal:  Proc Natl Acad Sci U S A       Date:  1976-07       Impact factor: 11.205

9.  Nuclear magnetic resonance study of the Schiff base in bacteriorhodopsin: counterion effects on the 15N shift anisotropy.

Authors:  H J de Groot; G S Harbison; J Herzfeld; R G Griffin
Journal:  Biochemistry       Date:  1989-04-18       Impact factor: 3.162

10.  Solid-state 13C NMR detection of a perturbed 6-s-trans chromophore in bacteriorhodopsin.

Authors:  G S Harbison; S O Smith; J A Pardoen; J M Courtin; J Lugtenburg; J Herzfeld; R A Mathies; R G Griffin
Journal:  Biochemistry       Date:  1985-11-19       Impact factor: 3.162

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  19 in total

Review 1.  Bioenergetics of the Archaea.

Authors:  G Schäfer; M Engelhard; V Müller
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

2.  Control of the pump cycle in bacteriorhodopsin: mechanisms elucidated by solid-state NMR of the D85N mutant.

Authors:  Mary E Hatcher; Jingui G Hu; Marina Belenky; Peter Verdegem; Johan Lugtenburg; Robert G Griffin; Judith Herzfeld
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

3.  Enlightening the photoactive site of channelrhodopsin-2 by DNP-enhanced solid-state NMR spectroscopy.

Authors:  Johanna Becker-Baldus; Christian Bamann; Krishna Saxena; Henrik Gustmann; Lynda J Brown; Richard C D Brown; Christian Reiter; Ernst Bamberg; Josef Wachtveitl; Harald Schwalbe; Clemens Glaubitz
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

4.  Characterisation of Schiff base and chromophore in green proteorhodopsin by solid-state NMR.

Authors:  Nicole Pfleger; Mark Lorch; Andreas C Woerner; Sarika Shastri; Clemens Glaubitz
Journal:  J Biomol NMR       Date:  2007-10-30       Impact factor: 2.835

5.  A blue-shifted light-driven proton pump for neural silencing.

Authors:  Yuki Sudo; Ayako Okazaki; Hikaru Ono; Jin Yagasaki; Seiya Sugo; Motoshi Kamiya; Louisa Reissig; Keiichi Inoue; Kunio Ihara; Hideki Kandori; Shin Takagi; Shigehiko Hayashi
Journal:  J Biol Chem       Date:  2013-05-28       Impact factor: 5.157

6.  The EF loop in green proteorhodopsin affects conformation and photocycle dynamics.

Authors:  Michaela Mehler; Frank Scholz; Sandra J Ullrich; Jiafei Mao; Markus Braun; Lynda J Brown; Richard C D Brown; Sarah A Fiedler; Johanna Becker-Baldus; Josef Wachtveitl; Clemens Glaubitz
Journal:  Biophys J       Date:  2013-07-16       Impact factor: 4.033

7.  Magic angle spinning NMR of the protonated retinylidene Schiff base nitrogen in rhodopsin: expression of 15N-lysine- and 13C-glycine-labeled opsin in a stable cell line.

Authors:  M Eilers; P J Reeves; W Ying; H G Khorana; S O Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1999-01-19       Impact factor: 11.205

8.  Spectral tuning in sensory rhodopsin I from Salinibacter ruber.

Authors:  Yuki Sudo; Yasufumi Yuasa; Jun Shibata; Daisuke Suzuki; Michio Homma
Journal:  J Biol Chem       Date:  2011-02-02       Impact factor: 5.157

9.  Evidence for a controlling role of water in producing the native bacteriorhodopsin structure.

Authors:  I Rousso; N Friedman; A Lewis; M Sheves
Journal:  Biophys J       Date:  1997-10       Impact factor: 4.033

10.  The primary structure of sensory rhodopsin II: a member of an additional retinal protein subgroup is coexpressed with its transducer, the halobacterial transducer of rhodopsin II.

Authors:  R Seidel; B Scharf; M Gautel; K Kleine; D Oesterhelt; M Engelhard
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

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