Literature DB >> 2742840

Nuclear magnetic resonance study of the Schiff base in bacteriorhodopsin: counterion effects on the 15N shift anisotropy.

H J de Groot1, G S Harbison, J Herzfeld, R G Griffin.   

Abstract

High-resolution, solid-state 15N NMR has been used to study the chemical shift anisotropies of the Schiff bases in bacteriorhodopsin (bR) and in an extensive series of model compounds. Using slow-spinning techniques, we are able to obtain sufficient rotational sideband intensity to determine the full 15N chemical shift anisotropy for the Schiff base nitrogen in bR548 and bR568. Comparisons are made between all-trans-bR568 and N-all-trans-retinylidene butylimine salts with halide, phenolate, and carboxylate counterions. It is argued that for the model compounds the variation in 15N chemical shift reflects the variation in (hydrogen) bond strength with the various counterions. The results suggest that carboxylates and tyrosinates may form hydrogen bonds of comparable strength in a hydrophobic environment. Thus, the hydrogen bonding strength of a counterion depends on factors that are not completely reflected in the solution pKa of its conjugate acid. For the model compounds, the two most downfield principal values of the 15N chemical shift tensor, sigma 22 and sigma 33, vary dramatically with different counterions, whereas sigma 11 remains essentially unaffected. In addition, there exists a linear correlation between sigma 22 and sigma 33, which suggests that a single mechanism is responsible for the variation in chemical shifts present in all three classes of model compounds. The data for bR568 follow this trend, but the isotropic shift is 11 ppm further upfield than any of the model compounds. This extreme value suggests an unusually weak hydrogen bond in the protein.

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Year:  1989        PMID: 2742840     DOI: 10.1021/bi00434a033

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  37 in total

1.  Electrical-to-mechanical coupling in purple membranes: membrane as electrostrictive medium.

Authors:  P Kietis; M Vengris; L Valkunas
Journal:  Biophys J       Date:  2001-04       Impact factor: 4.033

Review 2.  Bioenergetics of the Archaea.

Authors:  G Schäfer; M Engelhard; V Müller
Journal:  Microbiol Mol Biol Rev       Date:  1999-09       Impact factor: 11.056

3.  Molecular dynamics study of the nature and origin of retinal's twisted structure in bacteriorhodopsin.

Authors:  E Tajkhorshid; J Baudry; K Schulten; S Suhai
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

4.  Simulation analysis of the retinal conformational equilibrium in dark-adapted bacteriorhodopsin.

Authors:  J Baudry; S Crouzy; B Roux; J C Smith
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

5.  Control of the pump cycle in bacteriorhodopsin: mechanisms elucidated by solid-state NMR of the D85N mutant.

Authors:  Mary E Hatcher; Jingui G Hu; Marina Belenky; Peter Verdegem; Johan Lugtenburg; Robert G Griffin; Judith Herzfeld
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

6.  Binding of a single divalent cation directly correlates with the blue-to-purple transition in bacteriorhodopsin.

Authors:  R Jonas; T G Ebrey
Journal:  Proc Natl Acad Sci U S A       Date:  1991-01-01       Impact factor: 11.205

Review 7.  Proton transfer and energy coupling in the bacteriorhodopsin photocycle.

Authors:  J K Lanyi
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

8.  Structural changes during the formation of early intermediates in the bacteriorhodopsin photocycle.

Authors:  Shigehiko Hayashi; Emad Tajkhorshid; Klaus Schulten
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

Review 9.  A unifying concept for ion translocation by retinal proteins.

Authors:  D Oesterhelt; J Tittor; E Bamberg
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

Review 10.  NMR studies of retinal proteins.

Authors:  L Zheng; J Herzfeld
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

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