Literature DB >> 8083242

A model for the tissue factor pathway to thrombin. II. A mathematical simulation.

K C Jones1, K G Mann.   

Abstract

A mathematical simulation of the tissue factor pathway to the generation of thrombin has been developed using a combination of empirical, estimated, and deduced rate constants for reactions involving the activation of factor IX, X, V, and VIII, in the formation of thrombin, as well as rate constants for the assembly of the coagulation enzyme complexes which involve factor VIIIa-factor IXa (intrinsic tenase) and factor Va-Xa (prothrombinase) assembled on phospholipid membrane. Differential equations describing the fate of each species in the reaction were developed and solved using an interactive procedure based upon the Runge-Kutta technique. In addition to the theoretical considerations involving the reactions of the tissue factor pathway, a physical constraint associated with the stability of the factor VIIIa-factor IXa complex has been incorporated into the model based upon the empirical observations associated with the stability of this complex. The model system provides a realistic accounting of the fates of each of the proteins in the coagulation reaction through a range of initiator (factor VIIa-tissue factor) concentrations ranging from 5 pM to 5 nM. The model is responsive to alterations in the concentrations of factor VIII, factor V, and their respective activated species, factor VIIIa and factor Va, and overall provides a reasonable approximation of empirical data. The computer model permits the assessment of the reaction over a broad range of conditions and provides a useful tool for the development and management of reaction studies.

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Year:  1994        PMID: 8083242

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  39 in total

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Authors:  I F Obraztsov; V M Kuz'min; M A Khanin
Journal:  Dokl Biochem Biophys       Date:  2002 Sep-Oct       Impact factor: 0.788

2.  Effect of factor VIII deficiency on generation of thrombin: a biomechanical approach.

Authors:  I F Obraztsov; V M Kuz'min; M A Khanin; A E Kogan; N M Anan'eva; E L Saenko
Journal:  Dokl Biochem Biophys       Date:  2002 Mar-Apr       Impact factor: 0.788

3.  Exponential growth by cross-catalytic cleavage of deoxyribozymogens.

Authors:  Matthew Levy; Andrew D Ellington
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-12       Impact factor: 11.205

4.  A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade.

Authors:  Zhiliang Xu; Joshua Lioi; Jian Mu; Malgorzata M Kamocka; Xiaomin Liu; Danny Z Chen; Elliot D Rosen; Mark Alber
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

5.  Taking the thrombin "fork".

Authors:  Kenneth G Mann
Journal:  Arterioscler Thromb Vasc Biol       Date:  2010-07       Impact factor: 8.311

6.  Is there value in kinetic modeling of thrombin generation? Yes.

Authors:  K G Mann
Journal:  J Thromb Haemost       Date:  2012-08       Impact factor: 5.824

7.  In vitro modeling of the influence of FVIII activity and heparin induced prolongation of APTT.

Authors:  Aida Mehmedagić; Selma Skrbo; Dzenita Softić; Midhat Haracić
Journal:  Bosn J Basic Med Sci       Date:  2005-08       Impact factor: 3.363

8.  Dilutional control of prothrombin activation at physiologically relevant shear rates.

Authors:  Laura M Haynes; Yves C Dubief; Thomas Orfeo; Kenneth G Mann
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

9.  Review of quantitative systems pharmacological modeling in thrombosis.

Authors:  Limei Cheng; Guo-Wei Wei; Tarek Leil
Journal:  Commun Inf Syst       Date:  2019-12-06

10.  The effect of high circulating estradiol levels on thrombin generation during in vitro fertilization.

Authors:  Kathleen E Brummel-Ziedins; Matthew Gissel; Charles Francis; John Queenan; Kenneth G Mann
Journal:  Thromb Res       Date:  2009-03-17       Impact factor: 3.944

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