Literature DB >> 8065902

Preparation of a DNA matrix via an electrochemically directed copolymerization of pyrrole and oligonucleotides bearing a pyrrole group.

T Livache1, A Roget, E Dejean, C Barthet, G Bidan, R Téoule.   

Abstract

A new methodology for the preparation of addressed DNA matrices is described. The process includes an electrochemically directed copolymerization of pyrrole and oligonucleotides bearing on their 5' end a pyrrole moiety introduced by phosphoramidite chemistry. The electro-controlled synthesis of the copolymer (poly-pyrrole) gives, in one step, a solid conducting film deposited on the surface of an electrode. The resulting polymer consists of pyrrole chains bearing covalently linked oligonucleotide. The polymer growth is limited to the electrode surface, so that it is possible to prepare a DNA matrix on a multiple electrode device by successive copolymerizations. A support bearing four oligonucleotides was used to detect three ras mutations on a synthetic DNA fragment.

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Year:  1994        PMID: 8065902      PMCID: PMC310255          DOI: 10.1093/nar/22.15.2915

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  11 in total

1.  Parallel analysis of oligodeoxyribonucleotide (oligonucleotide) interactions. I. Analysis of factors influencing oligonucleotide duplex formation.

Authors:  U Maskos; E M Southern
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

2.  Light-directed, spatially addressable parallel chemical synthesis.

Authors:  S P Fodor; J L Read; M C Pirrung; L Stryer; A T Lu; D Solas
Journal:  Science       Date:  1991-02-15       Impact factor: 47.728

3.  End attachment of phenol-oligonucleotide conjugates to diazotized cellulose.

Authors:  M Fontanel; H Bazin; R Téoule
Journal:  Bioconjug Chem       Date:  1993 Sep-Oct       Impact factor: 4.774

4.  A study of oligonucleotide reassociation using large arrays of oligonucleotides synthesised on a glass support.

Authors:  U Maskos; E M Southern
Journal:  Nucleic Acids Res       Date:  1993-10-11       Impact factor: 16.971

5.  A method for DNA sequencing by hybridization with oligonucleotide matrix.

Authors:  K R Khrapko; A A Khorlin; I B Ivanov; G M Yershov; S K Vasilenko; V L Florentiev; A D Mirzabekov
Journal:  DNA Seq       Date:  1991

6.  A dot-blot screening procedure for mutated ras oncogenes using synthetic oligodeoxynucleotides.

Authors:  M Verlaan-de Vries; M E Bogaard; H van den Elst; J H van Boom; A J van der Eb; J L Bos
Journal:  Gene       Date:  1986       Impact factor: 3.688

7.  Single-base mutational analysis of cancer and genetic diseases using membrane bound modified oligonucleotides.

Authors:  Y Zhang; M Y Coyne; S G Will; C H Levenson; E S Kawasaki
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

8.  Genetic analysis of amplified DNA with immobilized sequence-specific oligonucleotide probes.

Authors:  R K Saiki; P S Walsh; C H Levenson; H A Erlich
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

9.  An oligonucleotide hybridization approach to DNA sequencing.

Authors:  K R Khrapko; A A Khorlyn; V V Shick; V L Florentiev; A D Mirzabekov
Journal:  FEBS Lett       Date:  1989-10-09       Impact factor: 4.124

10.  Synthesis and use of labelled nucleoside phosphoramidite building blocks bearing a reporter group: biotinyl, dinitrophenyl, pyrenyl and dansyl.

Authors:  A Roget; H Bazin; R Teoule
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

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  12 in total

Review 1.  Polypyrrole-peptide microarray for biomolecular interaction analysis by SPR imaging.

Authors:  Marie-Bernadette Villiers; Sandra Cortès; Carine Brakha; Patrice Marche; André Roget; Thierry Livache
Journal:  Methods Mol Biol       Date:  2009

2.  Protein-peptide arrays for detection of specific anti-hepatitis D virus (HDV) genotype 1, 6, and 8 antibodies among HDV-infected patients by surface plasmon resonance imaging.

Authors:  Marie-Bernadette Villiers; Jean-Claude Cortay; Sandra Cortès; Bénédicte Bloquel; Ségolène Brichler; Carine Brakha; Alan Kay; Nisrine Falah; Fabien Zoulim; Christophe Marquette; Patrice N Marche; Paul Dény
Journal:  J Clin Microbiol       Date:  2015-01-28       Impact factor: 5.948

3.  Theoretical analysis of the kinetics of DNA hybridization with gel-immobilized oligonucleotides.

Authors:  M A Livshits; A D Mirzabekov
Journal:  Biophys J       Date:  1996-11       Impact factor: 4.033

4.  DNA analysis and diagnostics on oligonucleotide microchips.

Authors:  G Yershov; V Barsky; A Belgovskiy; E Kirillov; E Kreindlin; I Ivanov; S Parinov; D Guschin; A Drobishev; S Dubiley; A Mirzabekov
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

5.  Thermostable DNA immobilization and temperature effects on surface hybridization.

Authors:  Dongbiao Ge; Xin Wang; Keeshan Williams; Rastislav Levicky
Journal:  Langmuir       Date:  2012-05-24       Impact factor: 3.882

Review 6.  Functional DNA-Polymer Conjugates.

Authors:  Colette J Whitfield; Meizhou Zhang; Pia Winterwerber; Yuzhou Wu; David Y W Ng; Tanja Weil
Journal:  Chem Rev       Date:  2021-03-19       Impact factor: 60.622

7.  Use of a multiplexed CMOS microarray to optimize and compare oligonucleotide binding to DNA probes synthesized or immobilized on individual electrodes.

Authors:  Karl Maurer; Nina Yazvenko; Jodi Wilmoth; John Cooper; Wanda Lyon; David Danley
Journal:  Sensors (Basel)       Date:  2010-08-05       Impact factor: 3.576

8.  A DNA biochip for on-the-spot multiplexed pathogen identification.

Authors:  Siu-Wai Yeung; Thomas Ming-Hung Lee; Hong Cai; I-Ming Hsing
Journal:  Nucleic Acids Res       Date:  2006-09-25       Impact factor: 16.971

9.  Detection of target DNA using fluorescent cationic polymer and peptide nucleic acid probes on solid support.

Authors:  Frédéric R Raymond; Hoang-Anh Ho; Régis Peytavi; Luc Bissonnette; Maurice Boissinot; François J Picard; Mario Leclerc; Michel G Bergeron
Journal:  BMC Biotechnol       Date:  2005-04-25       Impact factor: 2.563

10.  Electrochemical DNA hybridization sensors based on conducting polymers.

Authors:  Md Mahbubur Rahman; Xiao-Bo Li; Nasrin Siraj Lopa; Sang Jung Ahn; Jae-Joon Lee
Journal:  Sensors (Basel)       Date:  2015-02-05       Impact factor: 3.576

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