Literature DB >> 8065339

Reconstitution of transcriptional activation domains by reiteration of short peptide segments reveals the modular organization of a glutamine-rich activation domain.

M Tanaka1, W Herr.   

Abstract

The POU domain activator Oct-2 contains an N-terminal glutamine-rich transcriptional activation domain. An 18-amino-acid segment (Q18III) from this region reconstituted a fully functional activation domain when tandemly reiterated and fused to either the Oct-2 or GAL4 DNA-binding domain. A minimal transcriptional activation domain likely requires three tandem Q18III segments, because one or two tandem Q18III segments displayed little activity, whereas three to five tandem segments were active and displayed increasing activity with increasing copy number. As with natural Oct-2 activation domains, in our assay a reiterated activation domain required a second homologous or heterologous activation domain to stimulate transcription effectively when fused to the Oct-2 POU domain. These results suggest that there are different levels of synergy within and among activation domains. Analysis of reiterated activation domains containing mutated Q18III segments revealed that leucines and glutamines, but not serines or threonines, are critical for activity in vivo. Curiously, several reiterated activation domains that were inactive in vivo were active in vitro, suggesting that there are significant functional differences in our in vivo and in vitro assays. Reiteration of a second 18-amino-acid segment from the Oct-2 glutamine-rich activation domain (Q18II) was also active, but its activity was DNA-binding domain specific, because it was active when fused to the GAL4 than to the Oct-2 DNA-binding domain. The ability of separate short peptide segments derived from a single transcriptional activation domain to activate transcription after tandem reiteration emphasizes the flexible and modular nature of a transcriptional activation domain.

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Year:  1994        PMID: 8065339      PMCID: PMC359132          DOI: 10.1128/mcb.14.9.6056-6067.1994

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  47 in total

Review 1.  Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins.

Authors:  P J Mitchell; R Tjian
Journal:  Science       Date:  1989-07-28       Impact factor: 47.728

2.  The ubiquitous octamer-binding protein Oct-1 contains a POU domain with a homeo box subdomain.

Authors:  R A Sturm; G Das; W Herr
Journal:  Genes Dev       Date:  1988-12       Impact factor: 11.361

3.  A human lymphoid-specific transcription factor that activates immunoglobulin genes is a homoeobox protein.

Authors:  C Scheidereit; J A Cromlish; T Gerster; K Kawakami; C G Balmaceda; R A Currie; R G Roeder
Journal:  Nature       Date:  1988-12-08       Impact factor: 49.962

Review 4.  How eukaryotic transcriptional activators work.

Authors:  M Ptashne
Journal:  Nature       Date:  1988-10-20       Impact factor: 49.962

5.  Activation of the U2 snRNA promoter by the octamer motif defines a new class of RNA polymerase II enhancer elements.

Authors:  M Tanaka; U Grossniklaus; W Herr; N Hernandez
Journal:  Genes Dev       Date:  1988-12       Impact factor: 11.361

6.  Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules.

Authors:  J D Klemm; M A Rould; R Aurora; W Herr; C O Pabo
Journal:  Cell       Date:  1994-04-08       Impact factor: 41.582

7.  The Oct-2 protein binds cooperatively to adjacent octamer sites.

Authors:  J H LeBowitz; R G Clerc; M Brenowitz; P A Sharp
Journal:  Genes Dev       Date:  1989-10       Impact factor: 11.361

8.  The B-cell-specific Oct-2 protein contains POU box- and homeo box-type domains.

Authors:  R G Clerc; L M Corcoran; J H LeBowitz; D Baltimore; P A Sharp
Journal:  Genes Dev       Date:  1988-12       Impact factor: 11.361

9.  Transcriptional activation modulated by homopolymeric glutamine and proline stretches.

Authors:  H P Gerber; K Seipel; O Georgiev; M Höfferer; M Hug; S Rusconi; W Schaffner
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

10.  The Oct-2 glutamine-rich and proline-rich activation domains can synergize with each other or duplicates of themselves to activate transcription.

Authors:  M Tanaka; W M Clouston; W Herr
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

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  18 in total

1.  PTIP, a novel BRCT domain-containing protein interacts with Pax2 and is associated with active chromatin.

Authors:  M S Lechner; I Levitan; G R Dressler
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

2.  TFIIB-facilitated recruitment of preinitiation complexes by a TAF-independent mechanism.

Authors:  Roderick T Hori; Shuping Xu; Xianyuan Hu; Sung Pyo
Journal:  Nucleic Acids Res       Date:  2004-07-22       Impact factor: 16.971

Review 3.  Transcriptional activation: is it rocket science?

Authors:  R Pollock; M Gilman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

4.  Interdigitated residues within a small region of VP16 interact with Oct-1, HCF, and DNA.

Authors:  J S Lai; W Herr
Journal:  Mol Cell Biol       Date:  1997-07       Impact factor: 4.272

Review 5.  POU domain transcription factors in embryonic development.

Authors:  G J Veenstra; P C van der Vliet; O H Destrée
Journal:  Mol Biol Rep       Date:  1997-08       Impact factor: 2.316

6.  Two distinct domains in Staf to selectively activate small nuclear RNA-type and mRNA promoters.

Authors:  C Schuster; A Krol; P Carbon
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

7.  The Gcn4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complex.

Authors:  C M Drysdale; B M Jackson; R McVeigh; E R Klebanow; Y Bai; T Kokubo; M Swanson; Y Nakatani; P A Weil; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

8.  Common effects of acidic activators on large-scale chromatin structure and transcription.

Authors:  Anne E Carpenter; Sevinci Memedula; Matthew J Plutz; Andrew S Belmont
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

9.  Identification of seven hydrophobic clusters in GCN4 making redundant contributions to transcriptional activation.

Authors:  B M Jackson; C M Drysdale; K Natarajan; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

10.  Tra1 as a screening target for transcriptional activation domain discovery.

Authors:  Chinmay Y Majmudar; Anne E Labut; Anna K Mapp
Journal:  Bioorg Med Chem Lett       Date:  2009-05-18       Impact factor: 2.823

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