Literature DB >> 8064866

On the evolution of arginases and related enzymes.

C A Ouzounis1, N C Kyrpides.   

Abstract

Sequence analysis of the arginase/agmatine ureohydrolase family, important enzymes in arginine/agmatine metabolism and the urea cycle, reveals the similarity of arginases to formiminoglutamate hydrolase (hutG) in Klebsiella aerogenes and to a previously unidentified open reading frame adjacent to the HMf locus of the archaebacterium Methanothermus fervidus. The gene structure and distribution of these homologous proteins across primary kingdoms suggest that this family is another example of a primordial enzyme possibly present in the universal common ancestor and that can be used as phylogenetic marker.

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Year:  1994        PMID: 8064866     DOI: 10.1007/bf00178255

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  22 in total

1.  The SWISS-PROT protein sequence data bank.

Authors:  A Bairoch; B Boeckmann
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  Nucleotide sequence and analysis of the speA gene encoding biosynthetic arginine decarboxylase in Escherichia coli.

Authors:  R C Moore; S M Boyle
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

3.  Fast and sensitive multiple sequence alignments on a microcomputer.

Authors:  D G Higgins; P M Sharp
Journal:  Comput Appl Biosci       Date:  1989-04

4.  Profile analysis: detection of distantly related proteins.

Authors:  M Gribskov; A D McLachlan; D Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

Review 5.  Compartmental and regulatory mechanisms in the arginine pathways of Neurospora crassa and Saccharomyces cerevisiae.

Authors:  R H Davis
Journal:  Microbiol Rev       Date:  1986-09

6.  Complete nucleotide sequence of cDNA and deduced amino acid sequence of rat liver arginase.

Authors:  S Kawamoto; Y Amaya; K Murakami; F Tokunaga; S Iwanaga; K Kobayashi; T Saheki; S Kimura; M Mori
Journal:  J Biol Chem       Date:  1987-05-05       Impact factor: 5.157

7.  Analysis and sequence of the speB gene encoding agmatine ureohydrolase, a putrescine biosynthetic enzyme in Escherichia coli.

Authors:  M B Szumanski; S M Boyle
Journal:  J Bacteriol       Date:  1990-02       Impact factor: 3.490

8.  Comprehensive sequence analysis of the 182 predicted open reading frames of yeast chromosome III.

Authors:  P Bork; C Ouzounis; C Sander; M Scharf; R Schneider; E Sonnhammer
Journal:  Protein Sci       Date:  1992-12       Impact factor: 6.725

9.  Developmental and hormonal regulation of the Xenopus liver-type arginase gene.

Authors:  Q Xu; B S Baker; J R Tata
Journal:  Eur J Biochem       Date:  1993-02-01

10.  HMf, a DNA-binding protein isolated from the hyperthermophilic archaeon Methanothermus fervidus, is most closely related to histones.

Authors:  K Sandman; J A Krzycki; B Dobrinski; R Lurz; J N Reeve
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

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  20 in total

Review 1.  Structure, mechanism, and inhibition of the zinc-dependent histone deacetylases.

Authors:  Nicholas J Porter; David W Christianson
Journal:  Curr Opin Struct Biol       Date:  2019-02-08       Impact factor: 6.809

2.  Helicobacter pylori arginase inhibits nitric oxide production by eukaryotic cells: a strategy for bacterial survival.

Authors:  A P Gobert; D J McGee; M Akhtar; G L Mendz; J C Newton; Y Cheng; H L Mobley; K T Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2001-11-20       Impact factor: 11.205

3.  Novel protein families in archaean genomes.

Authors:  C Ouzonis; N Kyrpides; C Sander
Journal:  Nucleic Acids Res       Date:  1995-02-25       Impact factor: 16.971

Review 4.  Structure, mechanism, and inhibition of histone deacetylases and related metalloenzymes.

Authors:  Patrick M Lombardi; Kathryn E Cole; Daniel P Dowling; David W Christianson
Journal:  Curr Opin Struct Biol       Date:  2011-08-25       Impact factor: 6.809

5.  Molecular characterization and regulation of the aguBA operon, responsible for agmatine utilization in Pseudomonas aeruginosa PAO1.

Authors:  Y Nakada; Y Jiang; T Nishijyo; Y Itoh; C D Lu
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

Review 6.  Evolution of the arginase fold and functional diversity.

Authors:  D P Dowling; L Di Costanzo; H A Gennadios; D W Christianson
Journal:  Cell Mol Life Sci       Date:  2008-07       Impact factor: 9.261

7.  Expression, crystallization and preliminary X-ray crystallographic analysis of human agmatinase.

Authors:  Kyoung Hoon Kim; Hyung Jun Ahn; Do Jin Kim; Hyung Ho Lee; Jun-Yong Ha; Hye-Kyung Kim; Hye-Jin Yoon; Se Won Suh
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-09-13

8.  Formiminoglutamase from Trypanosoma cruzi is an arginase-like manganese metalloenzyme.

Authors:  Yang Hai; Reilly Jane Dugery; David Healy; David W Christianson
Journal:  Biochemistry       Date:  2013-11-21       Impact factor: 3.162

9.  Identification, cloning, sequencing, and overexpression of the gene encoding proclavaminate amidino hydrolase and characterization of protein function in clavulanic acid biosynthesis.

Authors:  T K Wu; R W Busby; T A Houston; D B McIlwaine; L A Egan; C A Townsend
Journal:  J Bacteriol       Date:  1995-07       Impact factor: 3.490

10.  Schistosoma mansoni arginase shares functional similarities with human orthologs but depends upon disulphide bridges for enzymatic activity.

Authors:  Jennifer M Fitzpatrick; Jose M Fuentes; Iain W Chalmers; Thomas A Wynn; Manuel Modolell; Karl F Hoffmann; Matthias Hesse
Journal:  Int J Parasitol       Date:  2008-08-06       Impact factor: 3.981

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