Literature DB >> 8029202

Three-dimensional structures of chimeric enzymes between Bacillus subtilis and Thermus thermophilus 3-isopropylmalate dehydrogenases.

K Onodera1, M Sakurai, H Moriyama, N Tanaka, K Numata, T Oshima, M Sato, Y Katsube.   

Abstract

The 3-D structures of two chimeric enzymes (4M6T and 2T2M6T) between the Bacillus subtilis and Thermus thermophilus 3-isopropylmalate dehydrogenases were analysed by X-ray diffraction in order to investigate their different thermostabilities. The structure of 2T2M6T was determined by the difference Fourier method and that of 4M6T by rigid body refinement, as based on the structure of the T. thermophilus enzyme. These structures were refined stereochemically to an R-factor of 0.193 at 2.5 A resolution for 4M6T and to an R-factor of 0.195 at 2.2 A resolution for 2T2M6T. The 3-D structures of 4M6T and 2T2M6T were very close to the structure of the T. thermophilus enzyme, conspicuous differences being at the molecular surface. In particular, 2T2M6T having a larger reduction in thermostability was more closely related to the T. thermophilus enzyme. However, their correlations between C alpha-atom displacements and the root squares of the temperature factors were significantly different from each other.

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Year:  1994        PMID: 8029202     DOI: 10.1093/protein/7.4.453

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  4 in total

1.  Molecular and phylogenetic characterization of isopropylmalate dehydrogenase of a thermoacidophilic archaeon, Sulfolobus sp. strain 7.

Authors:  T Suzuki; Y Inoki; A Yamagishi; T Iwasaki; T Wakagi; T Oshima
Journal:  J Bacteriol       Date:  1997-02       Impact factor: 3.490

2.  Serial increase in the thermal stability of 3-isopropylmalate dehydrogenase from Bacillus subtilis by experimental evolution.

Authors:  S Akanuma; A Yamagishi; N Tanaka; T Oshima
Journal:  Protein Sci       Date:  1998-03       Impact factor: 6.725

3.  A stable intermediate in the thermal unfolding process of a chimeric 3-isopropylmalate dehydrogenase between a thermophilic and a mesophilic enzymes.

Authors:  Y Hayashi-Iwasaki; K Numata; A Yamagishi; K Yutani; M Sakurai; N Tanaka; T Oshima
Journal:  Protein Sci       Date:  1996-03       Impact factor: 6.725

4.  Further stabilization of 3-isopropylmalate dehydrogenase of an extreme thermophile, Thermus thermophilus, by a suppressor mutation method.

Authors:  T Kotsuka; S Akanuma; M Tomuro; A Yamagishi; T Oshima
Journal:  J Bacteriol       Date:  1996-02       Impact factor: 3.490

  4 in total

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