Literature DB >> 8025597

The role of scaffold attachment regions in the structural and functional organization of plant chromatin.

P Breyne1, M Van Montagu, G Gheysen.   

Abstract

Studies on nuclear scaffolds and scaffold attachment regions (SARs) have recently been extended to different plant species and indicate that SARs are involved in the structural and functional organization of the plant genome, as is the case for other eukaryotes. One type of SAR seems to delimit structural chromatin loops and may also border functional units of gene expression and DNA replication. Another group of SARs map close to regulatory elements and may be directly involved in gene expression. In this overview, we summarize the structural and functional properties of plant SARs in comparison with those of SARs from animals and yeast.

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Year:  1994        PMID: 8025597     DOI: 10.1007/bf01973987

Source DB:  PubMed          Journal:  Transgenic Res        ISSN: 0962-8819            Impact factor:   2.788


  65 in total

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Journal:  Eur J Biochem       Date:  1989-11-20

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Journal:  J Cell Biochem       Date:  1991-10       Impact factor: 4.429

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Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-15       Impact factor: 11.205

4.  A position-effect assay for boundaries of higher order chromosomal domains.

Authors:  R Kellum; P Schedl
Journal:  Cell       Date:  1991-03-08       Impact factor: 41.582

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Authors:  J Bode; K Maass
Journal:  Biochemistry       Date:  1988-06-28       Impact factor: 3.162

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Journal:  Cell       Date:  1986-01-31       Impact factor: 41.582

7.  Isolation of matrices from maize leaf nuclei: identification of a matrix-binding site adjacent to the Adh1 gene.

Authors:  Z Avramova; J L Bennetzen
Journal:  Plant Mol Biol       Date:  1993-09       Impact factor: 4.076

8.  Nuclear matrix and transcriptional activity of the mouse alpha-globin gene.

Authors:  N Kirov; L Djondjurov; R Tsanev
Journal:  J Mol Biol       Date:  1984-12-15       Impact factor: 5.469

9.  In situ localization of DNA topoisomerase II, a major polypeptide component of the Drosophila nuclear matrix fraction.

Authors:  M Berrios; N Osheroff; P A Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

10.  Preferential, cooperative binding of DNA topoisomerase II to scaffold-associated regions.

Authors:  Y Adachi; E Käs; U K Laemmli
Journal:  EMBO J       Date:  1989-12-20       Impact factor: 11.598

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  11 in total

1.  Elevation of transgene expression level by flanking matrix attachment regions (MAR) is promoter dependent: a study of the interactions of six promoters with the RB7 3' MAR.

Authors:  S Luke Mankin; George C Allen; Thomas Phelan; Steven Spiker; William F Thompson
Journal:  Transgenic Res       Date:  2003-02       Impact factor: 2.788

2.  TM2, a novel strong matrix attachment region isolated from tobacco, increases transgene expression in transgenic rice calli and plants.

Authors:  Hua Xue; Yu-Tao Yang; Chang-Ai Wu; Guo-Dong Yang; Meng-Meng Zhang; Cheng-Chao Zheng
Journal:  Theor Appl Genet       Date:  2005-01-20       Impact factor: 5.699

3.  Higher order chromatin structures in maize and Arabidopsis.

Authors:  A L Paul; R J Ferl
Journal:  Plant Cell       Date:  1998-08       Impact factor: 11.277

4.  High-level transgene expression in plant cells: effects of a strong scaffold attachment region from tobacco.

Authors:  G C Allen; G Hall; S Michalowski; W Newman; S Spiker; A K Weissinger; W F Thompson
Journal:  Plant Cell       Date:  1996-05       Impact factor: 11.277

5.  The heat shock cognate 80 gene of tomato is flanked by matrix attachment regions.

Authors:  A M Chinn; L Comai
Journal:  Plant Mol Biol       Date:  1996-12       Impact factor: 4.076

6.  The beta-phaseolin 5' matrix attachment region acts as an enhancer facilitator.

Authors:  A H van der Geest; T C Hall
Journal:  Plant Mol Biol       Date:  1997-02       Impact factor: 4.076

7.  Creation and validation of a widely applicable multiple gene transfer vector system for stable transformation in plant.

Authors:  Quanxi Sun; Jiang Liu; Yaxiao Li; Qin Zhang; Shihua Shan; Xinzheng Li; Baoxiu Qi
Journal:  Plant Mol Biol       Date:  2013-07-10       Impact factor: 4.076

8.  Analysis of the chromatin domain organisation around the plastocyanin gene reveals an MAR-specific sequence element in Arabidopsis thaliana.

Authors:  C M van Drunen; R W Oosterling; G M Keultjes; P J Weisbeek; R van Driel; S C Smeekens
Journal:  Nucleic Acids Res       Date:  1997-10-01       Impact factor: 16.971

9.  The influence of matrix attachment regions on transgene expression in Arabidopsis thaliana wild type and gene silencing mutants.

Authors:  Miguel F C De Bolle; Katleen M J Butaye; Inge J W M Goderis; Piet F J Wouters; Anni Jacobs; Stijn L Delauré; Ann Depicker; Bruno P A Cammue
Journal:  Plant Mol Biol       Date:  2007-03       Impact factor: 4.076

10.  The arcelin-5 gene of Phaseolus vulgaris directs high seed-specific expression in transgenic Phaseolus acutifolius and Arabidopsis plants.

Authors:  A Goossens; W Dillen; J De Clercq; M Van Montagu; G Angenon
Journal:  Plant Physiol       Date:  1999-08       Impact factor: 8.005

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